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run pyspark copy/move from R
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library(processx) | |
library(stringr) | |
runPysparkCopy <- function(fsFrom, fsTo, move=FALSE) { | |
pyscript_file <- tempfile(tmpdir="/tmp") | |
fileh<-file(pyscript_file) | |
copy_or_move <- if(move) "mv" else "cp" | |
writeLines(stringr::str_interp(" | |
from pyspark.dbutils import DBUtils | |
from pyspark.context import SparkContext | |
from pyspark.sql.session import SparkSession | |
sc = SparkContext('local') | |
spark = SparkSession(sc) | |
print(type(spark)) | |
dbutils = DBUtils(spark) | |
dbutils.fs.${copy_or_move}('${fsFrom}', '${fsTo}', True) | |
sc.stop()"), fileh) | |
close(fileh) | |
log::Info("*********************************** Copying with R. From:", fsFrom, " to: ", fsTo) | |
p <- processx::process$new("bash", c("-c", "pyspark"), stdin=pyscript_file,stdout = "|") | |
p$read_all_output_lines() #this waits too, p$wait() is also possible | |
p$get_exit_status() | |
} |
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