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August 20, 2018 21:23
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from allensdk.core.mouse_connectivity_cache import MouseConnectivityCache | |
mcc = MouseConnectivityCache(manifest_file="/data/dynamic-brain-workshop/mouse_connectivity_cache/manifest.json", | |
resolution=10) | |
tv, _ = mcc.get_template_volume() | |
fig, ax = plt.subplots(figsize=(10,10)) | |
plt.imshow(tv[:,515,:], cmap='gray') | |
plt.show() |
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