Created
October 2, 2019 08:44
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(partial) EasyBuild log for failed build of /scratch/edmondac-admin/eb-_DXAOA/files_pr8316/a/ANTLR/ANTLR-2.7.7-GCCcore-7.3.0.eb (PR #8316)
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| == 2019-10-02 09:44:41,609 easyblock.py:279 INFO This is EasyBuild 4.0.1.dev0-re6956d4fcab2123c6702f11cd2b907efee117cef (framework: 4.0.1.dev0-r83f96cb6cfe7169a037a3f26e4ec0964fecd2291, easyblocks: 4.0.1.dev0-re6956d4fcab2123c6702f11cd2b907efee117cef) on host bear-pg0305u03a.bear.cluster. | |
| == 2019-10-02 09:44:41,609 easyblock.py:285 INFO This is easyblock ConfigureMake from module easybuild.easyblocks.generic.configuremake (/rds/bear-apps/devel/github/edmondac-eb-contrib/src/easybuild-easyblocks/easybuild/easyblocks/generic/configuremake.py) | |
| == 2019-10-02 09:44:41,609 easyblock.py:840 INFO Build dir set to /dev/shm/build-edmondac-admin/edmondac-admin-contrib/ANTLR/2.7.7/GCCcore-7.3.0 | |
| == 2019-10-02 09:44:41,609 easyblock.py:900 INFO Software install dir set to /rds/bear-apps/devel/github/edmondac-eb-contrib/EL7/EL7-power9/software/ANTLR/2.7.7-GCCcore-7.3.0 | |
| == 2019-10-02 09:44:41,610 easyblock.py:905 INFO Module install dir set to /rds/bear-apps/devel/github/edmondac-eb-contrib/EL7/EL7-power9/modules/all | |
| == 2019-10-02 09:44:41,610 easyblock.py:264 INFO Init completed for application name ANTLR version 2.7.7 | |
| == 2019-10-02 09:44:41,610 easyblock.py:3035 INFO Obtained application instance of for ANTLR (easyblock: ConfigureMake) | |
| == 2019-10-02 09:44:41,610 one.py:149 INFO Skipping reformatting value for parameter 'toolchain' | |
| == 2019-10-02 09:44:41,612 filetools.py:1264 INFO Creating directory /scratch/edmondac-admin/eb-_DXAOA/reprod_20191002094441_40403 (parents: True, set_gid: False, sticky: False) | |
| == 2019-10-02 09:44:41,613 easyblock.py:3213 INFO Dumped easyconfig instance to /scratch/edmondac-admin/eb-_DXAOA/reprod_20191002094441_40403/ANTLR-2.7.7-GCCcore-7.3.0.eb | |
| == 2019-10-02 09:44:41,613 filetools.py:1264 INFO Creating directory /scratch/edmondac-admin/eb-_DXAOA/reprod_20191002094441_40403/easyblocks (parents: True, set_gid: False, sticky: False) | |
| == 2019-10-02 09:44:41,613 filetools.py:1734 INFO /rds/bear-apps/devel/github/edmondac-eb-contrib/src/easybuild-easyblocks/easybuild/easyblocks/generic/configuremake.py copied to /scratch/edmondac-admin/eb-_DXAOA/reprod_20191002094441_40403/easyblocks/configuremake.py | |
| == 2019-10-02 09:44:41,613 easyblock.py:3228 INFO Dumped easyblock configuremake.py required for reproduction to /scratch/edmondac-admin/eb-_DXAOA/reprod_20191002094441_40403/easyblocks | |
| == 2019-10-02 09:44:41,613 easyblock.py:1601 INFO Number of iterations to perform for central part of installation procedure: 1 | |
| == 2019-10-02 09:44:41,614 build_log.py:260 INFO building and installing ANTLR/2.7.7-GCCcore-7.3.0... | |
| == 2019-10-02 09:44:41,614 build_log.py:260 INFO fetching files... | |
| == 2019-10-02 09:44:41,614 easyblock.py:2813 INFO Starting fetch step | |
| == 2019-10-02 09:44:41,614 easyblock.py:2819 INFO Running method fetch_step part of step fetch | |
| == 2019-10-02 09:44:41,614 easyblock.py:1682 WARNING Easyconfig does not specify an EasyBuild-version (key 'easybuild_version')! Assuming the latest version | |
| == 2019-10-02 09:44:41,615 filetools.py:404 INFO Command eb found at /rds/bear-apps/devel/github/edmondac-eb-contrib/EL7/EL7-power9/venv-dev-github-contrib/bin/eb | |
| == 2019-10-02 09:44:41,687 easyblock.py:668 INFO Found file antlr-2.7.7.tar.gz at /rds/bear-sysadmin/configmgmt/easybuild/sources/a/ANTLR/antlr-2.7.7.tar.gz | |
| == 2019-10-02 09:44:41,687 easyblock.py:393 INFO Added sources: [{'path': '/rds/bear-sysadmin/configmgmt/easybuild/sources/a/ANTLR/antlr-2.7.7.tar.gz', 'cmd': None, 'finalpath': '/dev/shm/build-edmondac-admin/edmondac-admin-contrib/ANTLR/2.7.7/GCCcore-7.3.0', 'name': 'antlr-2.7.7.tar.gz', 'checksum': '853aeb021aef7586bda29e74a6b03006bcb565a755c86b66032d8ec31b67dbb9'}] | |
| == 2019-10-02 09:44:41,687 filetools.py:404 INFO Command eb found at /rds/bear-apps/devel/github/edmondac-eb-contrib/EL7/EL7-power9/venv-dev-github-contrib/bin/eb | |
| == 2019-10-02 09:44:41,688 easyblock.py:668 INFO Found file ANTLR-2.7.7_includes.patch at /scratch/edmondac-admin/eb-_DXAOA/files_pr8316/a/ANTLR/ANTLR-2.7.7_includes.patch | |
| == 2019-10-02 09:44:41,688 easyblock.py:459 INFO Added patches: [{'path': '/scratch/edmondac-admin/eb-_DXAOA/files_pr8316/a/ANTLR/ANTLR-2.7.7_includes.patch', 'name': 'ANTLR-2.7.7_includes.patch', 'checksum': 'd167d3248a03301bc93efcb37d5df959aae6794968e42231af0b0dd26d6a2e66'}] | |
| == 2019-10-02 09:44:41,714 easyblock.py:1733 INFO md5 checksum for /rds/bear-sysadmin/configmgmt/easybuild/sources/a/ANTLR/antlr-2.7.7.tar.gz: 01cc9a2a454dd33dcd8c856ec89af090 | |
| == 2019-10-02 09:44:41,720 easyblock.py:1733 INFO sha256 checksum for /rds/bear-sysadmin/configmgmt/easybuild/sources/a/ANTLR/antlr-2.7.7.tar.gz: 853aeb021aef7586bda29e74a6b03006bcb565a755c86b66032d8ec31b67dbb9 | |
| == 2019-10-02 09:44:41,720 easyblock.py:1733 INFO md5 checksum for /scratch/edmondac-admin/eb-_DXAOA/files_pr8316/a/ANTLR/ANTLR-2.7.7_includes.patch: 5d601773d1fd219df6b0ae858691cc1f | |
| == 2019-10-02 09:44:41,720 easyblock.py:1733 INFO sha256 checksum for /scratch/edmondac-admin/eb-_DXAOA/files_pr8316/a/ANTLR/ANTLR-2.7.7_includes.patch: d167d3248a03301bc93efcb37d5df959aae6794968e42231af0b0dd26d6a2e66 | |
| == 2019-10-02 09:44:41,720 easyblock.py:1768 INFO Checking dirs that need to be created: ['/rds/bear-apps/devel/github/edmondac-eb-contrib/EL7/EL7-power9/software/ANTLR/2.7.7-GCCcore-7.3.0', '/rds/bear-apps/devel/github/edmondac-eb-contrib/EL7/EL7-power9/modules/all/ANTLR', '/rds/bear-apps/devel/github/edmondac-eb-contrib/EL7/EL7-power9/modules/tools/ANTLR'] | |
| == 2019-10-02 09:44:41,722 filetools.py:1264 INFO Creating directory /rds/bear-apps/devel/github/edmondac-eb-contrib/EL7/EL7-power9/software/ANTLR/2.7.7-GCCcore-7.3.0 (parents: True, set_gid: False, sticky: False) | |
| == 2019-10-02 09:44:41,889 filetools.py:1264 INFO Creating directory /rds/bear-apps/devel/github/edmondac-eb-contrib/EL7/EL7-power9/modules/all/ANTLR (parents: True, set_gid: False, sticky: False) | |
| == 2019-10-02 09:44:42,428 filetools.py:1264 INFO Creating directory /rds/bear-apps/devel/github/edmondac-eb-contrib/EL7/EL7-power9/modules/tools/ANTLR (parents: True, set_gid: False, sticky: False) | |
| == 2019-10-02 09:44:42,604 filetools.py:1264 INFO Creating directory /rds/bear-sysadmin/configmgmt/easybuild/sources/generic/eb_v4.0.1.dev0/ConfigureMake (parents: True, set_gid: False, sticky: False) | |
| == 2019-10-02 09:44:44,018 filetools.py:550 INFO Downloaded file config.guess from url https://git.savannah.gnu.org/gitweb/?p=config.git;a=blob_plain;f=config.guess;hb=59e2ce0e6b46bb47ef81b68b600ed087e14fdaad to /rds/bear-sysadmin/configmgmt/easybuild/sources/generic/eb_v4.0.1.dev0/ConfigureMake/config.guess | |
| == 2019-10-02 09:44:44,018 filetools.py:582 INFO Successful download of file config.guess from url https://git.savannah.gnu.org/gitweb/?p=config.git;a=blob_plain;f=config.guess;hb=59e2ce0e6b46bb47ef81b68b600ed087e14fdaad to path /rds/bear-sysadmin/configmgmt/easybuild/sources/generic/eb_v4.0.1.dev0/ConfigureMake/config.guess | |
| == 2019-10-02 09:44:44,021 filetools.py:1148 INFO Adjusting permissions recursively for /rds/bear-sysadmin/configmgmt/easybuild/sources/generic/eb_v4.0.1.dev0/ConfigureMake/config.guess | |
| == 2019-10-02 09:44:44,022 configuremake.py:139 INFO Downloaded recent config.guess to /rds/bear-sysadmin/configmgmt/easybuild/sources/generic/eb_v4.0.1.dev0/ConfigureMake/config.guess, using it if required | |
| == 2019-10-02 09:44:44,022 build_log.py:260 INFO creating build dir, resetting environment... | |
| == 2019-10-02 09:44:44,022 easyblock.py:2813 INFO Starting ready step | |
| == 2019-10-02 09:44:44,022 easyblock.py:2819 INFO Running method check_readiness_step part of step ready | |
| == 2019-10-02 09:44:44,030 run.py:219 INFO running cmd: ulimit -u | |
| == 2019-10-02 09:44:44,057 easyblock.py:1620 INFO Setting parallelism: 36 | |
| == 2019-10-02 09:44:44,070 environment.py:97 INFO Environment variable LD_LIBRARY_PATH set to (previous value: '') | |
| == 2019-10-02 09:44:44,071 environment.py:97 INFO Environment variable LD_PRELOAD set to (previous value: '') | |
| == 2019-10-02 09:44:44,071 easyblock.py:1634 WARNING Loaded modules detected: ['bb-variables/13', 'slurm-moab-wrappers/2', 'slurm-helpers/3', 'openmpi-env/5', 'bear-licences/5', 'bb-singularity-conf/1', 'bluebear/20'] | |
| == 2019-10-02 09:44:44,071 easyblock.py:2819 INFO Running method make_builddir part of step ready | |
| == 2019-10-02 09:44:44,071 filetools.py:1264 INFO Creating directory /dev/shm/build-edmondac-admin/edmondac-admin-contrib/ANTLR/2.7.7/GCCcore-7.3.0 (parents: True, set_gid: False, sticky: False) | |
| == 2019-10-02 09:44:44,071 easyblock.py:2819 INFO Running method reset_env part of step ready | |
| == 2019-10-02 09:44:44,072 easyblock.py:2819 INFO Running method handle_iterate_opts part of step ready | |
| == 2019-10-02 09:44:44,072 build_log.py:260 INFO unpacking... | |
| == 2019-10-02 09:44:44,072 easyblock.py:2813 INFO Starting source step | |
| == 2019-10-02 09:44:44,073 easyblock.py:2819 INFO Running method checksum_step part of step source | |
| == 2019-10-02 09:44:44,080 easyblock.py:1784 INFO Checksum verification for /rds/bear-sysadmin/configmgmt/easybuild/sources/a/ANTLR/antlr-2.7.7.tar.gz using 853aeb021aef7586bda29e74a6b03006bcb565a755c86b66032d8ec31b67dbb9 passed. | |
| == 2019-10-02 09:44:44,080 easyblock.py:1784 INFO Checksum verification for /scratch/edmondac-admin/eb-_DXAOA/files_pr8316/a/ANTLR/ANTLR-2.7.7_includes.patch using d167d3248a03301bc93efcb37d5df959aae6794968e42231af0b0dd26d6a2e66 passed. | |
| == 2019-10-02 09:44:44,080 easyblock.py:2819 INFO Running method extract_step part of step source | |
| == 2019-10-02 09:44:44,080 easyblock.py:1855 INFO Unpacking source antlr-2.7.7.tar.gz | |
| == 2019-10-02 09:44:44,081 run.py:219 INFO running cmd: tar xzf /rds/bear-sysadmin/configmgmt/easybuild/sources/a/ANTLR/antlr-2.7.7.tar.gz | |
| == 2019-10-02 09:44:44,157 build_log.py:260 INFO patching... | |
| == 2019-10-02 09:44:44,157 easyblock.py:2813 INFO Starting patch step | |
| == 2019-10-02 09:44:44,157 easyblock.py:2819 INFO Running method patch_step part of step patch | |
| == 2019-10-02 09:44:44,157 easyblock.py:1867 INFO Applying patch ANTLR-2.7.7_includes.patch | |
| == 2019-10-02 09:44:44,158 run.py:219 INFO running cmd: patch -b -p0 -i /scratch/edmondac-admin/eb-_DXAOA/files_pr8316/a/ANTLR/ANTLR-2.7.7_includes.patch | |
| == 2019-10-02 09:44:44,197 build_log.py:260 INFO preparing... | |
| == 2019-10-02 09:44:44,197 easyblock.py:2813 INFO Starting prepare step | |
| == 2019-10-02 09:44:44,198 easyblock.py:2819 INFO Running method prepare_step part of step prepare | |
| == 2019-10-02 09:44:44,338 build_log.py:164 ERROR EasyBuild crashed with an error (at easybuild/base/exceptions.py:124 in __init__): Missing modules for dependencies (use --robot?): binutils/2.30-GCCcore-7.3.0, Java/1.8 (at easybuild/tools/toolchain/toolchain.py:458 in _check_dependencies) | |
| == 2019-10-02 09:44:44,339 easyblock.py:3065 WARNING build failed (first 300 chars): Missing modules for dependencies (use --robot?): binutils/2.30-GCCcore-7.3.0, Java/1.8 | |
| == 2019-10-02 09:44:44,339 easyblock.py:294 INFO Closing log for application name ANTLR version 2.7.7 |
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