Created
June 2, 2022 18:19
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| name: biostars | |
| channels: | |
| - conda-forge | |
| - bioconda | |
| - defaults | |
| dependencies: | |
| - wget | |
| - seqkit | |
| - csvkit | |
| - parallel | |
| - entrez-direct | |
| - minimap2 | |
| - bwa | |
| - bowtie2 | |
| - emboss | |
| - r-base>=4 | |
| - bedtools | |
| - samtools>=1.14 | |
| - sra-tools | |
| - seqtk | |
| - datamash | |
| - bcftools | |
| - freebayes | |
| - subread | |
| - bioawk | |
| - hisat2 | |
| - trimmomatic | |
| - fastqc | |
| - snpeff==5.0 | |
| - blast | |
| - mafft | |
| - ucsc-bedgraphtobigwig | |
| - pip | |
| - pip: | |
| - bio |
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