Download and visualize Structures.js

var ons = rdf.createStore()
rdf.importURL(ons,
"http://github.com/egonw/onssolubility/raw/master/ons.solubility.rdf/ons.rdf")

var results = rdf.sparql(ons, "PREFIX ons: <http://spreadsheet.google.com/plwwufp30hfq0udnEmRD1aQ/onto#> " +
    "PREFIX chemblog: <http://blueobelisk.sourceforge.net/chemistryblogs/>" +
    "PREFIX dc: <http://purl.org/dc/elements/1.1/> " +
    "SELECT DISTINCT ?title ?smiles WHERE { " +
    "  ?solvent dc:title ?title . " +
    "  ?solvent chemblog:smiles ?smiles ." +
    "}"
)

mols = cdk.createMoleculeList()
for (i=0; i<results.size(); i++) {
  var row = results.get(i);
  var title = row.get(0);
  var smiles = row.get(1);
  mol = cdk.fromSMILES(smiles);
  mol = cdk.generate2dCoordinates(mol)
  mol.getAtomContainer().setProperty("title", title);
  mols.add(mol)
}
cdk.saveSDFile("/Virtual/test.sdf", mols)
ui.open("/Virtual/test.sdf")