error log file from CI run PR_3471

gdas_anlstat.log

Begin anlstat.sh at Tue 08 Apr 2025 09:20:27 PM UTC
+ anlstat.sh[7]. /gpfs/f6/drsa-precip3/world-shared/global/CI/3471/global-workflow/ush/load_ufsda_modules.sh
++ load_ufsda_modules.sh[4][[ ehuxB == *x* ]]
++ load_ufsda_modules.sh[5]set_x=YES
++ load_ufsda_modules.sh[10][[ NO == \N\O ]]
++ load_ufsda_modules.sh[11]echo 'Loading modules quietly...'
Loading modules quietly...
++ load_ufsda_modules.sh[12]set +x
Running "module reset". Resetting modules to system default. The following $MODULEPATH directories have been removed: None

Lmod is automatically replacing "intel/2023.2.0" with "intel-classic/2023.2.0".


The following have been reloaded with a version change:
  1) cray-mpich/8.1.28 => cray-mpich/8.1.29


Currently Loaded Modules:
  1) craype-x86-genoa
  2) perftools-base/23.12.0
  3) xpmem/2.9.6-1.1_20240510205610__g087dc11fc19d
  4) cray-pmi/6.1.13
  5) CmrsEnv/default
  6) TimeZoneEDT/default
  7) DefApps/default
  8) cray-dsmml/0.2.2
  9) cray-libsci/25.03.0
 10) PrgEnv-intel/8.5.0
 11) intel-classic/2023.2.0
 12) craype/2.7.30
 13) stack-intel/2023.2.0
 14) libfabric/1.20.1
 15) craype-network-ofi
 16) cray-mpich/8.1.29
 17) stack-cray-mpich/8.1.29
 18) cmake/3.23.1
 19) gettext/0.20.2
 20) pcre2/10.42
 21) nghttp2/1.57.0
 22) curl/8.4.0
 23) zlib/1.2.13
 24) git/2.42.0
 25) pkg-config/0.29.2
 26) hdf5/1.14.0
 27) parallel-netcdf/1.12.2
 28) snappy/1.1.10
 29) zstd/1.5.2
 30) c-blosc/1.21.5
 31) netcdf-c/4.9.2
 32) nccmp/1.9.0.1
 33) netcdf-fortran/4.6.1
 34) antlr/2.7.7
 35) gsl/2.7.1
 36) nco/5.0.6
 37) parallelio/2.5.10
 38) wget/1.21.3
 39) libxcrypt/4.4.35
 40) sqlite/3.43.2
 41) util-linux-uuid/2.38.1
 42) python/3.10.13
 43) boost/1.83.0
 44) py-setuptools/63.4.3
 45) py-numpy/1.22.3
 46) bufr/12.0.1
 47) git-lfs/2.11.0
 48) ecbuild/3.7.2
 49) openjpeg/2.3.1
 50) eccodes/2.32.0
 51) eigen/3.4.0
 52) openblas/0.3.24
 53) eckit/1.24.5
 54) fftw/3.3.10
 55) fckit/0.11.0
 56) fiat/1.2.0
 57) ectrans/1.2.0
 58) fms/2023.04
 59) esmf/8.6.0
 60) qhull/2020.2
 61) atlas/0.35.1
 62) sp/2.5.0
 63) gsl-lite/0.37.0
 64) libjpeg/2.1.0
 65) krb5/1.20.1
 66) libtirpc/1.3.3
 67) hdf/4.2.15
 68) jedi-cmake/1.4.0
 69) libpng/1.6.37
 70) libxaw/1.10.13
 71) udunits/2.2.28
 72) ncview/2.1.9
 73) netcdf-cxx4/4.3.1
 74) json/3.10.5
 75) crtm-fix/2.4.0.1_emc
 76) crtm/2.4.0.1
 77) rocoto/1.3.6
 78) bacio/2.4.1
 79) w3emc/2.10.0
 80) prod_util/2.1.1
 81) py-markupsafe/2.1.3
 82) py-jinja2/3.0.3
 83) py-cftime/1.0.3.4
 84) py-netcdf4/1.5.8
 85) py-pybind11/2.11.0
 86) py-pycodestyle/2.11.0
 87) libyaml/0.2.5
 88) py-pyyaml/6.0
 89) py-scipy/1.11.3
 90) py-packaging/23.1
 91) py-bottleneck/1.3.7
 92) py-numexpr/2.8.4
 93) py-et-xmlfile/1.0.1
 94) py-openpyxl/3.1.2
 95) py-six/1.16.0
 96) py-python-dateutil/2.8.2
 97) py-pytz/2023.3
 98) py-pyxlsb/1.0.10
 99) py-xlrd/2.0.1
100) py-xlsxwriter/3.1.7
101) py-xlwt/1.3.0
102) py-pandas/1.5.3
103) py-xarray/2023.7.0
104) py-f90nml/1.4.3
105) py-pip/23.1.2
106) GDAS/gaeac6.intel

 

++ load_ufsda_modules.sh[74]pip list
+ pip[2]exec /autofs/ncrc-svm1_proj/epic/spack-stack/c6/spack-stack-1.6.0/envs/unified-env/install/intel/2023.2.0/python-3.10.13-i6ygptq/bin/python3.10 /autofs/ncrc-svm1_proj/epic/spack-stack/c6/spack-stack-1.6.0/envs/unified-env/install/intel/2023.2.0/py-pip-23.1.2-io6kmbs/bin/pip list
Package            Version
------------------ ---------
Bottleneck         1.3.7
certifi            2025.1.31
cffi               1.17.1
cftime             1.0.3.4
charset-normalizer 3.4.1
cryptography       44.0.1
Deprecated         1.2.18
et-xmlfile         1.0.1
f90nml             1.4.3
idna               3.10
Jinja2             3.0.3
MarkupSafe         2.1.3
netCDF4            1.5.8
numexpr            2.8.4
numpy              1.22.3
openpyxl           3.1.2
packaging          23.1
pandas             1.5.3
pip                23.1.2
py-ncepbufr        12.0.1
pybind11           2.11.0
pycodestyle        2.11.0
pycparser          2.22
PyGithub           2.6.1
PyJWT              2.10.1
PyNaCl             1.5.0
python-dateutil    2.8.2
pytz               2023.3
pyxlsb             1.0.10
PyYAML             6.0
requests           2.32.3
scipy              1.11.3
setuptools         63.4.3
six                1.16.0
typing_extensions  4.12.2
urllib3            2.3.0
wrapt              1.17.2
xarray             2023.7.0
xlrd               2.0.1
XlsxWriter         3.1.7
xlwt               1.3.0
++ load_ufsda_modules.sh[77]wxflowPATH=/gpfs/f6/drsa-precip3/world-shared/global/CI/3471/global-workflow/ush/python
++ load_ufsda_modules.sh[78]PYTHONPATH=/autofs/ncrc-svm1_proj/epic/spack-stack/c6/spack-stack-1.6.0/envs/unified-env/install/intel/2023.2.0/py-pip-23.1.2-io6kmbs/lib/python3.10/site-packages:/autofs/ncrc-svm1_proj/epic/spack-stack/c6/spack-stack-1.6.0/envs/unified-env/install/intel/2023.2.0/py-f90nml-1.4.3-7xxgqlk/lib/python3.10/site-packages:/autofs/ncrc-svm1_proj/epic/spack-stack/c6/spack-stack-1.6.0/envs/unified-env/install/intel/2023.2.0/py-xarray-2023.7.0-oid2rbk/lib/python3.10/site-packages:/autofs/ncrc-svm1_proj/epic/spack-stack/c6/spack-stack-1.6.0/envs/unified-env/install/intel/2023.2.0/py-pandas-1.5.3-p6yyu6x/lib/python3.10/site-packages:/autofs/ncrc-svm1_proj/epic/spack-stack/c6/spack-stack-1.6.0/envs/unified-env/install/intel/2023.2.0/py-xlwt-1.3.0-zci65qq/lib/python3.10/site-packages:/autofs/ncrc-svm1_proj/epic/spack-stack/c6/spack-stack-1.6.0/envs/unified-env/install/intel/2023.2.0/py-xlsxwriter-3.1.7-db4hzry/lib/python3.10/site-packages:/autofs/ncrc-svm1_proj/epic/spack-stack/c6/spack-stack-1.6.0/envs/unified-env/install/intel/2023.2.0/py-xlrd-2.0.1-6o735jg/lib/python3.10/site-packages:/autofs/ncrc-svm1_proj/epic/spack-stack/c6/spack-stack-1.6.0/envs/unified-env/install/intel/2023.2.0/py-pyxlsb-1.0.10-lrr4yjj/lib/python3.10/site-packages:/autofs/ncrc-svm1_proj/epic/spack-stack/c6/spack-stack-1.6.0/envs/unified-env/install/intel/2023.2.0/py-pytz-2023.3-bkw2ioz/lib/python3.10/site-packages:/autofs/ncrc-svm1_proj/epic/spack-stack/c6/spack-stack-1.6.0/envs/unified-env/install/intel/2023.2.0/py-python-dateutil-2.8.2-trlt3zm/lib/python3.10/site-packages:/autofs/ncrc-svm1_proj/epic/spack-stack/c6/spack-stack-1.6.0/envs/unified-env/install/intel/2023.2.0/py-six-1.16.0-mvau3v3/lib/python3.10/site-packages:/autofs/ncrc-svm1_proj/epic/spack-stack/c6/spack-stack-1.6.0/envs/unified-env/install/intel/2023.2.0/py-openpyxl-3.1.2-ndip5pc/lib/python3.10/site-packages:/autofs/ncrc-svm1_proj/epic/spack-stack/c6/spack-stack-1.6.0/envs/unified-env/install/intel/2023.2.0/py-et-xmlfile-1.0.1-dknwtbz/lib/python3.10/site-packages:/autofs/ncrc-svm1_proj/epic/spack-stack/c6/spack-stack-1.6.0/envs/unified-env/install/intel/2023.2.0/py-numexpr-2.8.4-cvokcvl/lib/python3.10/site-packages:/autofs/ncrc-svm1_proj/epic/spack-stack/c6/spack-stack-1.6.0/envs/unified-env/install/intel/2023.2.0/py-bottleneck-1.3.7-5goln7t/lib/python3.10/site-packages:/autofs/ncrc-svm1_proj/epic/spack-stack/c6/spack-stack-1.6.0/envs/unified-env/install/intel/2023.2.0/py-packaging-23.1-yig5okp/lib/python3.10/site-packages:/autofs/ncrc-svm1_proj/epic/spack-stack/c6/spack-stack-1.6.0/envs/unified-env/install/intel/2023.2.0/py-scipy-1.11.3-fcvyhea/lib/python3.10/site-packages:/autofs/ncrc-svm1_proj/epic/spack-stack/c6/spack-stack-1.6.0/envs/unified-env/install/intel/2023.2.0/py-pyyaml-6.0-hqdhpbo/lib/python3.10/site-packages:/autofs/ncrc-svm1_proj/epic/spack-stack/c6/spack-stack-1.6.0/envs/unified-env/install/intel/2023.2.0/py-pycodestyle-2.11.0-guhedpa/lib/python3.10/site-packages:/autofs/ncrc-svm1_proj/epic/spack-stack/c6/spack-stack-1.6.0/envs/unified-env/install/intel/2023.2.0/py-pybind11-2.11.0-54psx65/lib/python3.10/site-packages:/autofs/ncrc-svm1_proj/epic/spack-stack/c6/spack-stack-1.6.0/envs/unified-env/install/intel/2023.2.0/py-netcdf4-1.5.8-rufgvlt/lib/python3.10/site-packages:/autofs/ncrc-svm1_proj/epic/spack-stack/c6/spack-stack-1.6.0/envs/unified-env/install/intel/2023.2.0/py-cftime-1.0.3.4-ycznqiy/lib/python3.10/site-packages:/autofs/ncrc-svm1_proj/epic/spack-stack/c6/spack-stack-1.6.0/envs/unified-env/install/intel/2023.2.0/py-jinja2-3.0.3-idy6lbr/lib/python3.10/site-packages:/autofs/ncrc-svm1_proj/epic/spack-stack/c6/spack-stack-1.6.0/envs/unified-env/install/intel/2023.2.0/py-markupsafe-2.1.3-for3ljo/lib/python3.10/site-packages:/autofs/ncrc-svm1_proj/epic/spack-stack/c6/spack-stack-1.6.0/envs/unified-env/install/intel/2023.2.0/bufr-12.0.1-aq4gepn/lib64/python3.10/site-packages:/autofs/ncrc-svm1_proj/epic/spack-stack/c6/spack-stack-1.6.0/envs/unified-env/install/intel/2023.2.0/bufr-12.0.1-aq4gepn/lib/python3.10/site-packages:/autofs/ncrc-svm1_proj/epic/spack-stack/c6/spack-stack-1.6.0/envs/unified-env/install/intel/2023.2.0/py-numpy-1.22.3-q6fwnnl/lib/python3.10/site-packages:/autofs/ncrc-svm1_proj/epic/spack-stack/c6/spack-stack-1.6.0/envs/unified-env/install/intel/2023.2.0/py-setuptools-63.4.3-4kwfsgh/lib/python3.10/site-packages:/gpfs/f6/drsa-precip3/world-shared/global/CI/3471/global-workflow/ush:/gpfs/f6/drsa-precip3/world-shared/global/CI/3471/global-workflow/ush/python
++ load_ufsda_modules.sh[79]export PYTHONPATH
++ load_ufsda_modules.sh[82]ulimit -S -s 1048576
++ load_ufsda_modules.sh[83]unset ulimit_s
+ anlstat.sh[8]export err=0
+ anlstat.sh[8]err=0
+ anlstat.sh[8]err_chk
+ err_chk[13]'[' -z 0 ']'
+ err_chk[14]'[' 0 -eq 0 ']'
/autofs/ncrc-svm1_proj/epic/spack-stack/c6/spack-stack-1.6.0/envs/unified-env/install/intel/2023.2.0/prod-util-2.1.1-ynnwpz3/bin/err_chk: line 14: pgm: unbound variable
+ anlstat.sh[1]postamble anlstat.sh 1744147227 1
+ preamble.sh[62]set +x
End anlstat.sh at 21:20:53 with error code 1 (time elapsed: 00:00:26)