Created
January 31, 2021 14:42
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install htslib with docker
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| # Install htslib (for bgzip) | |
| RUN mkdir /opt/htslib | |
| RUN curl -L https://github.com/samtools/htslib/releases/download/1.11/htslib-1.11.tar.bz2 --out htslib-1.11.tar.bz2 && \ | |
| tar -xf htslib-1.11.tar.bz2 && \ | |
| cd htslib-1.11 && \ | |
| ./configure --disable-bz2 --disable-lzma --prefix=/opt/htslib/ && \ | |
| make && \ | |
| make install | |
| ENV PATH="${PATH}:/opt/htslib/bin" |
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