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-asdfasdf ShEx Validation Manifest.md

the manifest can be used in:

• ShEx.JS shex-simple interface

.manifest.yaml

- schemaLabel: schema
  schemaURL: schema.shex
  dataLabel: data
  dataURL: data.ttl
  queryMap: |
    <PatientX>@START
  staticVars: {}
  outputSchemaURL: outputSchema.shex
  outputShapeMap: "<tag:BPfhir123>@<collector>"
  status: conformant

data.ttl

BASE <http://my.data.example/medical/>
PREFIX med: <http://dam.example/med#>
PREFIX xsd: <http://www.w3.org/2001/XMLSchema#>

<PatientX>
    med:name "Sue" ;
    med:reports <Report1>, <Report2> .

<Report1>
    med:reportNo "one" ;
    med:results <Res00>, <Res01> .

<Res00>
    med:systolic [
      med:value "100"^^xsd:float ;
      med:units "mmHg"
    ] ;
    med:diastolic [
      med:value "60"^^xsd:float ;
      med:units "mmHg"
    ] .
<Res01>
    med:systolic [
      med:value "101"^^xsd:float ;
      med:units "mmHg"
    ] ;
    med:diastolic [
      med:value "61"^^xsd:float ;
      med:units "mmHg"
    ] .

<Report2>
    med:reportNo "two" ;
    med:results <Res10>, <Res11> .

<Res10>
    med:systolic [
      med:value "110"^^xsd:float ;
      med:units "mmHg"
    ] ;
    med:diastolic [
      med:value "70"^^xsd:float ;
      med:units "mmHg"
    ] .
<Res11>
    med:systolic [
      med:value "111"^^xsd:float ;
      med:units "mmHg"
    ] ;
    med:diastolic [
      med:value "71"^^xsd:float ;
      med:units "mmHg"
    ] ;
    med:someConstProp "asdf" .

outputSchema.shex

PREFIX fhir: <http://hl7.org/fhir-rdf/>
PREFIX sct: <http://snomed.info/sct/>
PREFIX xsd: <http://www.w3.org/2001/XMLSchema#>
PREFIX bp: <http://shex.io/extensions/Map/#BPDAM->
PREFIX Map: <http://shex.io/extensions/Map/#>

start = @<collector>

<Patient> {
  fhir:Patient.name LITERAL %Map:{ bp:name %};
}

<collector> {
  fhir:item @<BPreport>*
}

<BPreport> {
  a [fhir:DiagnosticReport]?;
  fhir:status ["final"];
  fhir:subject @<Patient>;
  fhir:coding { fhir:code [sct:Blood_Pressure] };
  fhir:component @<sysBP>;
  fhir:component @<diaBP>
}
<BPfhir> {
  a [fhir:Observation]?;
  fhir:subject @<Patient>;
  fhir:coding { fhir:code [sct:Blood_Pressure] };
  fhir:component @<sysBP>;
  fhir:component @<diaBP>
}
<sysBP> {
  a [fhir:Observation]?;
  fhir:coding { fhir:code [sct:Systolic_Blood_Pressure] };
  fhir:valueQuantity {
    a [fhir:Quantity]?;
    fhir:value xsd:float %Map:{ bp:sysVal %};
    fhir:units xsd:string %Map:{ bp:sysUnits %}
  }
}
<diaBP> {
  a [fhir:Observation]?;
  fhir:coding { fhir:code [sct:Diastolic_Blood_Pressure] };
  fhir:valueQuantity {
    a [fhir:Quantity]?;
    fhir:value xsd:float %Map:{ bp:diaVal %};
    fhir:units xsd:string %Map:{ bp:diaUnits %}
  };
  fhir:foo xsd:string? %Map:{ <http://abc.example/someConstant> %}
}

schema.shex

PREFIX  : <http://dam.example/med#>
PREFIX xsd: <http://www.w3.org/2001/XMLSchema#>
PREFIX bp: <http://shex.io/extensions/Map/#BPDAM->
PREFIX Map: <http://shex.io/extensions/Map/#>

start = @<PatientDAM>

<PatientDAM> {
  :name LITERAL %Map:{ bp:name %};
  :reports @<ReportsDAM>* %Map:{ bp:reports %}
}

<ReportsDAM> {
  :reportNo LITERAL %Map:{ bp:reportNo %};
  :results @<BPunitsDAM>* %Map:{ bp:bp %}
}

<BPunitsDAM> {
  :systolic {
    :value xsd:float %Map:{ bp:sysVal %};
    :units xsd:string %Map:{ bp:sysUnits %}
  };
  :diastolic {
    :value xsd:float %Map:{ bp:diaVal %};
    :units xsd:string %Map:{ bp:diaUnits %}
  };
  :someConstProp xsd:string? %Map:{ <http://abc.example/someConstant> %}
}