Last active
October 9, 2018 09:07
-
-
Save explodecomputer/602e0c9f8a8fa594934d840219601e33 to your computer and use it in GitHub Desktop.
Overfitting and adjusted r square
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
# How does adjusted r-square do with overfitting? | |
rm(list=ls()) | |
set.seed(101) | |
library(ggplot2) | |
library(tidyr) | |
y <- rnorm(1000) | |
x <- matrix(rnorm(1000 * 1000), 1000, 1000) | |
res <- expand.grid(var=1:300, r.squared=NA, adj.r.squared=NA, pred.r.squared=NA) | |
for(i in 1:nrow(res)) | |
{ | |
message(i) | |
ou <- summary(lm(y ~ x[,1:res$var[i]])) | |
res$r.squared[i] <- ou$r.squared | |
res$adj.r.squared[i] <- ou$adj.r.squared | |
pred <- x[,1:res$var[i]] %*% as.matrix(coefficients(ou)[-1,1]) | |
res$pred.r.squared[i] <- cor(y, pred)^2 | |
} | |
res <- gather(res, "key", "value", r.squared, adj.r.squared, pred.r.squared) | |
ggplot(res, aes(x=var, y=value)) + | |
geom_point(aes(colour=key)) + | |
geom_line(aes(colour=key)) + | |
labs(x="Number of variables", y="Rsq or Adjusted Rsq") + | |
scale_colour_brewer(type="qual") | |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment