fepegar

#!/usr/bin/env python3

"""
This script prints out the revision number and bitstream ID of the latest
nightly build of 3D Slicer.
"""

import re
import sys
from sys import platform as _platform

fepegar

from glob import glob
from time import gmtime, strftime
from os.path import expanduser, splitext, basename, join, isdir
import qt, vtk, ctk, slicer
import numpy as np
import SimpleITK as sitk

ONE_BY_THREE_LAYOUT_ID = 501

fepegar

;= @echo off
;= rem Call DOSKEY and use this file as the macrofile
;= %SystemRoot%\system32\doskey /listsize=1000 /macrofile=%0%
;= rem In batch mode, jump to the end of the file
;= goto:eof
;= Add aliases below here
e.=explorer .
glol=git log --oneline --all --graph --decorate  $*
ls=ls --show-control-chars -F --color $*
pwd=cd

fepegar

import numpy as np
import matplotlib.pyplot as plt


def k_means(points, num_classes, epsilon=1e-5, plot=False):
    means = np.random.rand(num_classes, 2)
    diff_means = np.inf

    while(diff_means > epsilon):
        # Assignment step

fepegar

Requirements:

• Python
• SimpleITK
• NumPy

Install

• conda
• SimpleITK and NumPy:

conda install numpy -y

fepegar

#!/usr/bin/env python

import re
import sys
from pathlib import Path
from sys import platform as _platform
import time
import shutil
import urllib.request
import tarfile

fepegar

import numpy as np

points = vtk.vtkPoints()
vertices = vtk.vtkCellArray()

sizes = vtk.vtkFloatArray()
sizes.SetName('Sizes')

colors = vtk.vtkFloatArray()
colors.SetName('Colors')

fepegar

import os
import sys
import argparse
from os.path import join, exists, isdir

"""
Usage: Slicer --no-main-window --python-script interpolateMergedContours.py -i labelmapsInDir -o labelmapsOutDir
"""

def interpolateMergedContours(inputImagePath, outputImagePath=None, outputMeshPath=None):

fepegar

from PyQt4.QtGui import QImage, qRgb
import numpy as np

class NotImplementedException:
    pass

gray_color_table = [qRgb(i, i, i) for i in range(256)]

def toQImage(im, copy=False):
    if im is None: