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flekschas/rao-2014-gm12878-mbol-1kb-mres-chr22-loops-hipiler-v140.json

Last active December 5, 2019 21:14
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HiPiler Example: Loop calls for chromosome 22 from Rao et al. (2014) GM12878 including distance-to-diagonal, noise, and sharpness measures. See http://hipiler.higlass.io for a live demo.
Raw
rao-2014-gm12878-mbol-1kb-mres-chr22-loops-hipiler-v140.json
{
"fgm": {
"fragmentsServer": "//higlass.io/api/v1/",
"fragmentsPrecision": 2,
"fragmentsDims": 22,
"fragmentsBaseRes": 1000,
"fragments": [
["chrom1", "start1", "end1", "strand1", "chrom2", "start2", "end2", "strand2", "dataset", "zoomOutLevel", "size", "distance-to-diagonal", "noise", "sharpness", "_test"],
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