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Since the original plugin has been developed for Sublime Text 2 we have to install it manually.
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Go to https://github.com/fredbenenson/sublime-cypher, download ZIP of the repo, extract the content and rename the folder to ‘Cypher’. You can download the original repo from https://github.com/kollhof/sublime-cypher but Fred Benenson introduced a handy fix for UTF-8 data, which hasn't integrated at the point of this writing.
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Open Sublime Text 3, and go to ‘Browse Packages’ (CTRL + COMMAND + P then type ‘browse’ and hit ENTER)
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In the file browser's window, move the previously downloaded folder from Step 1 into here.
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Restart Sublime Text 3.
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Open a file containing some Cypher queries and switch to Cypher mode (CTRL + COMMAND + P then type ‘Cypher’ and hit ENTER)
Let say you are in PHP syntax mode. Easily switch to Cypher by clicking on the PHP text at the bottom right. You will find a list of language syntaxes to choose from there.