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;; gorilla-repl.fileformat = 1 | |
;; ** | |
;;; # Forecasting NYC taxi passengers | |
;; ** | |
;; ** | |
;;; _Felix Andrews_ | |
;;; | |
;;; Adapted from part of Marcus Lewis' [Predicting power consumptions with HTM](http://mrcslws.com/gorilla/?path=hotgym.clj). | |
;;; | |
;;; This is just an extra comparison on the case study presented in the paper | |
;;; * [Continuous online sequence learning with an unsupervised neural network model](http://arxiv.org/abs/1512.05463). | |
;;; | |
;;; I show results from a weighted running/sliding average by hour (k-NN) method. | |
;;; | |
;; ** | |
;; @@ | |
(ns comportex.notebook.nyc-taxi | |
(:require [clj-time.core :as t] | |
[clj-time.format :as f] | |
[clj-time.predicates :as pr] | |
[clojure.data.csv :as csv] | |
[clojure.java.io :as io] | |
[clojure.set :as set] | |
[gorilla-plot.core :as plot] | |
[gorilla-repl.table :refer [table-view]] | |
[gorilla-renderable.core :as renderable]) | |
(:use [clojure.pprint] | |
[clojure.stacktrace])) | |
;; @@ | |
;; => | |
;;; {"type":"html","content":"<span class='clj-nil'>nil</span>"} | |
;; <= | |
;; ** | |
;;; ## <a name="the_data" /> The data | |
;; ** | |
;; ** | |
;;; Load in the NYC taxi (perturbed) dataset. | |
;; ** | |
;; @@ | |
(def the-data | |
(with-open [in-file (io/reader "data/nyc_taxi_perturb.csv")] | |
(doall (->> (csv/read-csv in-file) | |
(drop 3) | |
(map (fn [[timestamp-str val-str]] | |
[timestamp-str | |
(int (Double/parseDouble val-str))])))))) | |
(def perturbed-at (* 24 2 274)) | |
(pprint (take 10 the-data)) | |
;; @@ | |
;; -> | |
;;; (["2014-07-01 00:00:00" 10844] | |
;;; ["2014-07-01 00:30:00" 8127] | |
;;; ["2014-07-01 01:00:00" 6210] | |
;;; ["2014-07-01 01:30:00" 4656] | |
;;; ["2014-07-01 02:00:00" 3820] | |
;;; ["2014-07-01 02:30:00" 2873] | |
;;; ["2014-07-01 03:00:00" 2369] | |
;;; ["2014-07-01 03:30:00" 2064] | |
;;; ["2014-07-01 04:00:00" 2221] | |
;;; ["2014-07-01 04:30:00" 2158]) | |
;;; | |
;; <- | |
;; => | |
;;; {"type":"html","content":"<span class='clj-nil'>nil</span>"} | |
;; <= | |
;; ** | |
;;; Each row is a `[timestamp passenger-count]` pair. | |
;;; | |
;;; Here's some data around the point of perturbation: | |
;; ** | |
;; @@ | |
(let [[n-drop n-take] [0 (* 24 2 10)]] | |
(plot/list-plot (->> (map-indexed (fn [i [timestamp passengers]] | |
[i passengers]) | |
the-data) | |
(drop n-drop) | |
(take n-take)) | |
:joined true | |
:color "red")) | |
;; @@ | |
;; => | |
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;; <= | |
;; ** | |
;;; It covers every half hour between the dates: | |
;; ** | |
;; @@ | |
[(first the-data) | |
(last the-data)] | |
;; @@ | |
;; => | |
;;; {"type":"list-like","open":"<span class='clj-vector'>[</span>","close":"<span class='clj-vector'>]</span>","separator":" ","items":[{"type":"list-like","open":"<span class='clj-vector'>[</span>","close":"<span class='clj-vector'>]</span>","separator":" ","items":[{"type":"html","content":"<span class='clj-string'>"2014-07-01 00:00:00"</span>"},{"type":"html","content":"<span class='clj-unkown'>10844</span>"}]},{"type":"list-like","open":"<span class='clj-vector'>[</span>","close":"<span class='clj-vector'>]</span>","separator":" ","items":[{"type":"html","content":"<span class='clj-string'>"2015-06-30 23:30:00"</span>"},{"type":"html","content":"<span class='clj-unkown'>17090</span>"}]}]} | |
;; <= | |
;; ** | |
;;; Let's shape the data into the sequence of inputs that will go into our model. Just fetch everything we might use. | |
;; ** | |
;; @@ | |
(def inputs | |
(->> the-data | |
(map (fn [[timestamp-string passengers]] | |
(let [timestamp (f/parse timestamp-string)] | |
{:timestamp timestamp-string | |
:day-of-week (t/day-of-week timestamp) | |
:hour-of-day (t/hour timestamp) | |
:is-weekend? (pr/weekend? timestamp) | |
:passengers passengers}))))) | |
;; @@ | |
;; => | |
;;; {"type":"html","content":"<span class='clj-var'>#'comportex.notebook.nyc-taxi/inputs</span>"} | |
;; <= | |
;; @@ | |
(table-view | |
(->> inputs | |
(drop (- perturbed-at (* 24 2 1))) | |
(take-nth 24) | |
(take 10) | |
(map (juxt :timestamp :day-of-week :hour-of-day :is-weekend? :passengers))) | |
:columns [:timestamp :day-of-week :hour-of-day :is-weekend? :passengers] | |
) | |
;; @@ | |
;; => | |
;;; {"type":"list-like","open":"<center><table>","close":"</table></center>","separator":"\n","items":[{"type":"list-like","open":"<tr><th>","close":"</th></tr>","separator":"</th><th>","items":[{"type":"html","content":"<span class='clj-keyword'>:timestamp</span>"},{"type":"html","content":"<span class='clj-keyword'>:day-of-week</span>"},{"type":"html","content":"<span class='clj-keyword'>:hour-of-day</span>"},{"type":"html","content":"<span class='clj-keyword'>:is-weekend?</span>"},{"type":"html","content":"<span class='clj-keyword'>:passengers</span>"}]},{"type":"list-like","open":"<tr><td>","close":"</td></tr>","separator":"</td><td>","items":[{"type":"html","content":"<span class='clj-string'>"2015-03-31 00:00:00"</span>"},{"type":"html","content":"<span class='clj-unkown'>2</span>"},{"type":"html","content":"<span class='clj-unkown'>0</span>"},{"type":"html","content":"<span class='clj-unkown'>false</span>"},{"type":"html","content":"<span class='clj-unkown'>10141</span>"}]},{"type":"list-like","open":"<tr><td>","close":"</td></tr>","separator":"</td><td>","items":[{"type":"html","content":"<span class='clj-string'>"2015-03-31 12:00:00"</span>"},{"type":"html","content":"<span class='clj-unkown'>2</span>"},{"type":"html","content":"<span class='clj-unkown'>12</span>"},{"type":"html","content":"<span class='clj-unkown'>false</span>"},{"type":"html","content":"<span class='clj-unkown'>17433</span>"}]},{"type":"list-like","open":"<tr><td>","close":"</td></tr>","separator":"</td><td>","items":[{"type":"html","content":"<span class='clj-string'>"2015-04-01 00:00:00"</span>"},{"type":"html","content":"<span class='clj-unkown'>3</span>"},{"type":"html","content":"<span class='clj-unkown'>0</span>"},{"type":"html","content":"<span class='clj-unkown'>false</span>"},{"type":"html","content":"<span class='clj-unkown'>11660</span>"}]},{"type":"list-like","open":"<tr><td>","close":"</td></tr>","separator":"</td><td>","items":[{"type":"html","content":"<span class='clj-string'>"2015-04-01 12:00:00"</span>"},{"type":"html","content":"<span class='clj-unkown'>3</span>"},{"type":"html","content":"<span class='clj-unkown'>12</span>"},{"type":"html","content":"<span class='clj-unkown'>false</span>"},{"type":"html","content":"<span class='clj-unkown'>18087</span>"}]},{"type":"list-like","open":"<tr><td>","close":"</td></tr>","separator":"</td><td>","items":[{"type":"html","content":"<span class='clj-string'>"2015-04-02 00:00:00"</span>"},{"type":"html","content":"<span class='clj-unkown'>4</span>"},{"type":"html","content":"<span class='clj-unkown'>0</span>"},{"type":"html","content":"<span class='clj-unkown'>false</span>"},{"type":"html","content":"<span class='clj-unkown'>13647</span>"}]},{"type":"list-like","open":"<tr><td>","close":"</td></tr>","separator":"</td><td>","items":[{"type":"html","content":"<span class='clj-string'>"2015-04-02 12:00:00"</span>"},{"type":"html","content":"<span class='clj-unkown'>4</span>"},{"type":"html","content":"<span class='clj-unkown'>12</span>"},{"type":"html","content":"<span class='clj-unkown'>false</span>"},{"type":"html","content":"<span class='clj-unkown'>18037</span>"}]},{"type":"list-like","open":"<tr><td>","close":"</td></tr>","separator":"</td><td>","items":[{"type":"html","content":"<span class='clj-string'>"2015-04-03 00:00:00"</span>"},{"type":"html","content":"<span class='clj-unkown'>5</span>"},{"type":"html","content":"<span class='clj-unkown'>0</span>"},{"type":"html","content":"<span class='clj-unkown'>false</span>"},{"type":"html","content":"<span class='clj-unkown'>18876</span>"}]},{"type":"list-like","open":"<tr><td>","close":"</td></tr>","separator":"</td><td>","items":[{"type":"html","content":"<span class='clj-string'>"2015-04-03 12:00:00"</span>"},{"type":"html","content":"<span class='clj-unkown'>5</span>"},{"type":"html","content":"<span class='clj-unkown'>12</span>"},{"type":"html","content":"<span class='clj-unkown'>false</span>"},{"type":"html","content":"<span class='clj-unkown'>20660</span>"}]},{"type":"list-like","open":"<tr><td>","close":"</td></tr>","separator":"</td><td>","items":[{"type":"html","content":"<span class='clj-string'>"2015-04-04 00:00:00"</span>"},{"type":"html","content":"<span class='clj-unkown'>6</span>"},{"type":"html","content":"<span class='clj-unkown'>0</span>"},{"type":"html","content":"<span class='clj-unkown'>true</span>"},{"type":"html","content":"<span class='clj-unkown'>20851</span>"}]},{"type":"list-like","open":"<tr><td>","close":"</td></tr>","separator":"</td><td>","items":[{"type":"html","content":"<span class='clj-string'>"2015-04-04 12:00:00"</span>"},{"type":"html","content":"<span class='clj-unkown'>6</span>"},{"type":"html","content":"<span class='clj-unkown'>12</span>"},{"type":"html","content":"<span class='clj-unkown'>true</span>"},{"type":"html","content":"<span class='clj-unkown'>19010</span>"}]}]} | |
;; <= | |
;; ** | |
;;; ## Shift (baseline) forecast | |
;; ** | |
;; @@ | |
(def lagged-inputs | |
(concat (repeat 5 (assoc (first inputs) :passengers 0)) | |
(drop-last 5 inputs))) | |
(println "lagged values corresponding") | |
(pprint (map (fn [i in lagged] | |
{:i i, :in (:passengers in), :lagged (:passengers lagged)}) | |
(range 10) inputs lagged-inputs)) | |
;; @@ | |
;; -> | |
;;; lagged values corresponding | |
;;; ({:i 0, :in 10844, :lagged 0} | |
;;; {:i 1, :in 8127, :lagged 0} | |
;;; {:i 2, :in 6210, :lagged 0} | |
;;; {:i 3, :in 4656, :lagged 0} | |
;;; {:i 4, :in 3820, :lagged 0} | |
;;; {:i 5, :in 2873, :lagged 10844} | |
;;; {:i 6, :in 2369, :lagged 8127} | |
;;; {:i 7, :in 2064, :lagged 6210} | |
;;; {:i 8, :in 2221, :lagged 4656} | |
;;; {:i 9, :in 2158, :lagged 3820}) | |
;;; | |
;; <- | |
;; => | |
;;; {"type":"html","content":"<span class='clj-nil'>nil</span>"} | |
;; <= | |
;; @@ | |
(def shift-forecast | |
(map :passengers inputs)) | |
;; @@ | |
;; => | |
;;; {"type":"html","content":"<span class='clj-var'>#'comportex.notebook.nyc-taxi/shift-forecast</span>"} | |
;; <= | |
;; ** | |
;;; ### Running average by hour | |
;;; | |
;;; Simply calculate the average 5-step-ahead value for this `hour-of-day` + `is-weekend?` combination. | |
;;; | |
;;; In other words, "It's hour 12 on a Tuesday. What usually happens after this?" | |
;; ** | |
;; @@ | |
(def avg-by-hour-forecast | |
(first | |
(reduce | |
(fn [[output average-builder] [i input prev-input]] | |
(when (zero? (mod i 1000)) (print ".")) | |
(let [{:keys [is-weekend? hour-of-day passengers]} input | |
average-builder (update average-builder [(:is-weekend? prev-input ) | |
(:hour-of-day prev-input)] | |
#(if-let [[total n] %] | |
[(+ total passengers) (inc n)] | |
[passengers 1])) | |
prediction (if-let [[total n] (get average-builder | |
[is-weekend? hour-of-day])] | |
(quot total n) | |
passengers)] | |
[(conj output prediction) average-builder])) | |
[[] {}] | |
(map vector (range) inputs lagged-inputs)))) | |
(println) | |
;; @@ | |
;; -> | |
;;; .................. | |
;;; | |
;; <- | |
;; => | |
;;; {"type":"html","content":"<span class='clj-nil'>nil</span>"} | |
;; <= | |
;; ** | |
;;; ### Weighted running average by hour (k-NN) | |
;;; | |
;;; A k-Nearest-Neighbors estimator. It simply calculates the weighted average next value for this `hour-of-day` + `day-of-week` combination, weighted by the nearness of the data points' current passenger count. | |
;;; | |
;;; In other words, "It's hour 12 on a Tuesday, and the current passenger count is 3200. What usually happens after this?" | |
;; ** | |
;; @@ | |
(defn weighted-mean | |
[weighted-xs] | |
(let [[total weight-sum] (reduce (fn [[total weight-sum] [x weight]] | |
[(+ total (* weight x)) | |
(+ weight-sum weight)]) | |
[0 0] | |
weighted-xs)] | |
(when-not (zero? weight-sum) | |
(/ total weight-sum)))) | |
(def knn-by-hour-forecast | |
(let [k 10] | |
(first | |
(reduce | |
(fn [[output average-builder] [i input prev-input]] | |
(when (zero? (mod i 1000)) (print ".") (flush)) | |
(let [{:keys [is-weekend? day-of-week hour-of-day passengers]} input | |
average-builder (update average-builder [(:day-of-week prev-input) | |
(:hour-of-day prev-input)] | |
#(assoc (or % (sorted-map)) | |
(:passengers prev-input) passengers)) | |
ordered-obs (get average-builder [day-of-week | |
hour-of-day]) | |
closest-index (if (seq ordered-obs) | |
(dec | |
(Math/abs | |
(java.util.Collections/binarySearch (keys ordered-obs) passengers | |
compare))) | |
0) | |
predictions (->> ordered-obs | |
(drop (- closest-index k)) | |
(take (* k 2)) | |
(sort-by (fn [[old-passengers _]] | |
(Math/abs (int (- old-passengers passengers))))) | |
(take k)) | |
aggregated (if (empty? predictions) | |
passengers | |
(->> predictions | |
(map (fn [[old-passengers v]] | |
[v | |
(/ 1 (-> (- old-passengers passengers) | |
int Math/abs | |
(+ 0.01)))])) | |
weighted-mean))] | |
[(conj output aggregated) average-builder])) | |
[[] {}] | |
(map vector (range) inputs lagged-inputs))))) | |
;; @@ | |
;; -> | |
;;; .................. | |
;; <- | |
;; => | |
;;; {"type":"html","content":"<span class='clj-var'>#'comportex.notebook.nyc-taxi/knn-by-hour-forecast</span>"} | |
;; <= | |
;; ** | |
;;; ### Weighted sliding average by hour (k-NN) | |
;; ** | |
;; @@ | |
(defn knn-by-hour-sliding | |
[k window-steps] | |
(first | |
(reduce | |
(fn [[output average-builder] [i input prev-input]] | |
(when (zero? (mod i 1000)) (print ".") (flush)) | |
(let [{:keys [is-weekend? day-of-week hour-of-day passengers]} input | |
average-builder (update average-builder [(:day-of-week prev-input) | |
(:hour-of-day prev-input)] | |
#(assoc (or % (sorted-map)) | |
i [(:passengers prev-input) passengers])) | |
indexed-obs (get average-builder [day-of-week | |
hour-of-day] (sorted-map)) | |
predictions (->> (subseq indexed-obs > (- i window-steps)) | |
(vals) | |
(sort-by (fn [[old-passengers _]] | |
(Math/abs (int (- old-passengers passengers))))) | |
(take k)) | |
aggregated (if (empty? predictions) | |
passengers | |
(->> predictions | |
(map (fn [[old-passengers v]] | |
[v | |
(/ 1 (-> (- old-passengers passengers) | |
int Math/abs | |
(+ 0.01)))])) | |
weighted-mean))] | |
[(conj output aggregated) average-builder])) | |
[[] {}] | |
(map vector (range) inputs lagged-inputs)))) | |
(def knn-by-hour-sliding-forecast-1000 (knn-by-hour-sliding 10 1000)) | |
(def knn-by-hour-sliding-forecast-3000 (knn-by-hour-sliding 10 3000)) | |
;; @@ | |
;; -> | |
;;; .................................... | |
;; <- | |
;; => | |
;;; {"type":"html","content":"<span class='clj-var'>#'comportex.notebook.nyc-taxi/knn-by-hour-sliding-forecast-3000</span>"} | |
;; <= | |
;; ** | |
;;; ## Forecast results | |
;; ** | |
;; @@ | |
(defn mean [xs] (/ (reduce + xs) (count xs))) | |
(defn abs [x] (if (neg? x) (- x) x)) | |
(defn mae | |
"mean absolute error" | |
[predicted observed] | |
(mean (map (comp abs -) observed predicted))) | |
(defn mape | |
"mean absolute error divided by mean actual value." | |
[predicted observed] | |
(double | |
(/ (mae predicted observed) | |
(mean observed)))) | |
(defn mape-excluding-warmup | |
[forecast warmup-steps] | |
(mape (drop warmup-steps forecast) | |
(drop (+ warmup-steps 5) (map :passengers inputs)))) | |
;; @@ | |
;; => | |
;;; {"type":"html","content":"<span class='clj-var'>#'comportex.notebook.nyc-taxi/mape-excluding-warmup</span>"} | |
;; <= | |
;; ** | |
;;; ### Shift | |
;; ** | |
;; @@ | |
(mape-excluding-warmup shift-forecast (* 24 2 7)) | |
;; @@ | |
;; => | |
;;; {"type":"html","content":"<span class='clj-double'>0.3265029292302994</span>"} | |
;; <= | |
;; ** | |
;;; ### Running average by hour | |
;; ** | |
;; @@ | |
(mape-excluding-warmup avg-by-hour-forecast (* 24 2 7)) | |
;; @@ | |
;; => | |
;;; {"type":"html","content":"<span class='clj-double'>0.1521830792015254</span>"} | |
;; <= | |
;; @@ | |
(mape-excluding-warmup avg-by-hour-forecast perturbed-at) | |
;; @@ | |
;; => | |
;;; {"type":"html","content":"<span class='clj-double'>0.1481880237819002</span>"} | |
;; <= | |
;; ** | |
;;; ### Weighted running KNN by hour | |
;; ** | |
;; @@ | |
(mape-excluding-warmup knn-by-hour-forecast (* 24 2 7)) | |
;; @@ | |
;; => | |
;;; {"type":"html","content":"<span class='clj-double'>0.09039234737451765</span>"} | |
;; <= | |
;; @@ | |
(mape-excluding-warmup knn-by-hour-forecast perturbed-at) | |
;; @@ | |
;; => | |
;;; {"type":"html","content":"<span class='clj-double'>0.10309088173334977</span>"} | |
;; <= | |
;; ** | |
;;; ### Weighted sliding KNN by hour (1000 steps) | |
;; ** | |
;; @@ | |
(mape-excluding-warmup knn-by-hour-sliding-forecast-1000 (* 24 2 7)) | |
;; @@ | |
;; => | |
;;; {"type":"html","content":"<span class='clj-double'>0.0914515448043314</span>"} | |
;; <= | |
;; @@ | |
(mape-excluding-warmup knn-by-hour-sliding-forecast-1000 perturbed-at) | |
;; @@ | |
;; => | |
;;; {"type":"html","content":"<span class='clj-double'>0.07595319209615771</span>"} | |
;; <= | |
;; ** | |
;;; ### Weighted sliding KNN by hour (3000 steps) | |
;; ** | |
;; @@ | |
(mape-excluding-warmup knn-by-hour-sliding-forecast-3000 (* 24 2 7)) | |
;; @@ | |
;; => | |
;;; {"type":"html","content":"<span class='clj-double'>0.08553116118479587</span>"} | |
;; <= | |
;; @@ | |
(mape-excluding-warmup knn-by-hour-sliding-forecast-3000 perturbed-at) | |
;; @@ | |
;; => | |
;;; {"type":"html","content":"<span class='clj-double'>0.08106487414326526</span>"} | |
;; <= | |
;; @@ | |
(let [[n-drop n-take] [(- perturbed-at (* 24 2 7)) (* 24 2 14)]] | |
(plot/compose | |
(plot/list-plot (->> (map-indexed (fn [i v] | |
[i (:passengers v)]) | |
inputs) | |
(drop n-drop) | |
(take n-take)) | |
:joined true | |
:color "black" | |
:plot-size 700) | |
(plot/list-plot (->> (map-indexed (fn [i v] | |
[(+ i 5) v]) | |
knn-by-hour-sliding-forecast-1000) | |
(drop n-drop) | |
(take n-take)) | |
:joined true | |
:color "blue" | |
:plot-size 700) | |
)) | |
;; @@ | |
;; => | |
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;; <= | |
;; @@ | |
(let [[n-drop n-take] [(- perturbed-at (* 24 2 7)) (* 24 2 14)]] | |
(plot/compose | |
(plot/list-plot (->> (map (fn [i v x] | |
[i (- v x)]) | |
(range) | |
(drop 5 (map :passengers inputs)) | |
knn-by-hour-forecast) | |
(drop n-drop) | |
(take n-take)) | |
:joined true | |
:color "blue" | |
:opacity 0.5 | |
:plot-size 700) | |
(plot/list-plot (->> (map (fn [i v x] | |
[i (- v x)]) | |
(range) | |
(drop 5 (map :passengers inputs)) | |
knn-by-hour-sliding-forecast-1000) | |
(drop n-drop) | |
(take n-take)) | |
:joined true | |
:color "red" | |
:opacity 0.5 | |
:plot-size 700) | |
(plot/list-plot [[n-drop 0] [(+ n-drop n-take) 0]] | |
:joined true | |
:color "black" | |
) | |
)) | |
;; @@ | |
;; => | |
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