Created
April 22, 2015 20:42
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Parse read-counts from Bam-Readcount output.
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| ls *tsv | xargs -i echo 'cut -f 1-4,6-9 {} |tr ":" "\t" | cut -f 1-4,6,20,34,48 | perl -ne '\''chomp$_; @array=split("\t"); if($array[3] == $array[4] || $array[3] == $array[5] || $array[3] == $array[6] || $array[3] == $array[7]){next;} else {print "$_\n";}'\'' > {}.formatted ' |
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