gdb output

gistfile1.txt

(gdb) run
Starting program: /home/bastian/bin/Metassembler/bin/mateAn -m 5000 -s 500 -p ./MIRA/CEstat/MIRA.ce/MIRA -e 0 -z 3 -q 20 -N 1 -f 6 -c 0.05 -n 30 -a ./MIRA/CEstat/BWTaln/MIRA.mtp.sam
---------- Parameters:
----------------------
-a : ./MIRA/CEstat/BWTaln/MIRA.mtp.sam
-m : 5000
-s : 500
-p : ./MIRA/CEstat/MIRA.ce/MIRA
-e : 0
-z : 3
-q : 20
-N : 1
-f : 6
-c : 0.05
-n : 30
---------- Writing Sort bedpe
----------------------


Program received signal SIGSEGV, Segmentation fault.
0x00007ffff7b915c8 in std::basic_string<char, std::char_traits<char>, std::allocator<char> >::basic_string(std::string const&) () from /usr/lib/x86_64-linux-gnu/libstdc++.so.6
(gdb) thread apply all bt full

Thread 1 (process 5495):
#0  0x00007ffff7b915c8 in std::basic_string<char, std::char_traits<char>, std::allocator<char> >::basic_string(std::string const&) () from /usr/lib/x86_64-linux-gnu/libstdc++.so.6
No symbol table info available.
#1  0x000000000040d576 in BDProw::BDProw(BDProw const&) ()
No symbol table info available.
#2  0x0000000000410a4b in __gnu_cxx::__normal_iterator<BDProw*, std::vector<BDProw, std::allocator<BDProw> > > std::__unguarded_partition<__gnu_cxx::__normal_iterator<BDProw*, std::vector<BDProw, std::allocator<BDProw> > >, BDProw, bool (*)(BDProw, BDProw)>(__gnu_cxx::__normal_iterator<BDProw*, std::vector<BDProw, std::allocator<BDProw> > >, __gnu_cxx::__normal_iterator<BDProw*, std::vector<BDProw, std::allocator<BDProw> > >, BDProw const&, bool (*)(BDProw, BDProw)) ()
No symbol table info available.
#3  0x000000000040f4ca in __gnu_cxx::__normal_iterator<BDProw*, std::vector<BDProw, std::allocator<BDProw> > > std::__unguarded_partition_pivot<__gnu_cxx::__normal_iterator<BDProw*, std::vector<BDProw, std::allocator<BDProw> > >, bool (*)(BDProw, BDProw)>(__gnu_cxx::__normal_iterator<BDProw*, std::vector<BDProw, std::allocator<BDProw> > >, __gnu_cxx::__normal_iterator<BDProw*, std::vector<BDProw, std::allocator<BDProw> > >, bool (*)(BDProw, BDProw)) ()
No symbol table info available.
#4  0x000000000040e859 in void std::__introsort_loop<__gnu_cxx::__normal_iterator<BDProw*, std::vector<BDProw, std::allocator<BDProw> > >, long, bool (*)(BDProw, BDProw)>(__gnu_cxx::__normal_iterator<BDProw*, std::vector<BDProw, std::allocator<BDProw> > >, __gnu_cxx::__normal_iterator<BDProw*, std::vector<BDProw, std::allocator<BDProw> > >, long, bool (*)(BDProw, BDProw)) ()
No symbol table info available.
#5  0x000000000040df08 in void std::sort<__gnu_cxx::__normal_iterator<BDProw*, std::vector<BDProw, std::allocator<BDProw> > >, bool (*)(BDProw, BDProw)>(__gnu_cxx::__normal_iterator<BDProw*, std::vector<BDProw, std::allocator<BDProw> > >, __gnu_cxx::__normal_iterator<BDProw*, std::vector<BDProw, std::allocator<BDProw> > >, bool (*)(BDProw, BDProw)) ()
No symbol table info available.
#6  0x0000000000409637 in BDPfile::sort() ()
No symbol table info available.
#7  0x000000000040a58e in SAMfile::writeBDPsort(std::ostream&, int) ()
No symbol table info available.
#8  0x0000000000403abb in main ()
No symbol table info available.