Created
January 22, 2020 05:36
-
-
Save gijzelaerr/24ee631811c671cd2e55ccb54c6017e4 to your computer and use it in GitHub Desktop.
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| [1;30mINFO[0m /vault-ike/gijs/buis/.venv/bin/cwltool 1.0.20190906054215 | |
| [1;30mINFO[0m Resolved '/vault-ike/gijs/buis/scratch/repo/5/1GC-pipeline.cwl' to 'file:///vault-ike/gijs/buis/scratch/repo/5/1GC-pipeline.cwl' | |
| [1;30mWARNING[0m [33mWorkflow checker warning: | |
| scratch/repo/5/1GC-pipeline.cwl:233:7: Source 'caltable_out' of type ["null", "Directory"] may be | |
| incompatible | |
| scratch/repo/5/1GC-pipeline.cwl:284:7: with sink 'table' of type "Directory"[0m | |
| [1;30mINFO[0m [workflow ] start | |
| [1;30mINFO[0m [workflow ] starting step untar | |
| [1;30mINFO[0m [step untar] start | |
| [1;30mINFO[0m [job untar] Output of job will be cached in /vault-ike/gijs/buis/scratch/cache/bdb907bb394e0467f3f3e9295c5070f2 | |
| [1;30mINFO[0m [job untar] /vault-ike/gijs/buis/scratch/cache/bdb907bb394e0467f3f3e9295c5070f2$ tar \ | |
| xvf \ | |
| /tmp/tmpn9i5tsmb/stg5dfd73bb-6ee8-48d0-913e-8026084ee2f6/ESO137-MeerKAT_OT-700chan.ms.tar | |
| ESO137-MeerKAT_OT-700chan.ms/ | |
| ESO137-MeerKAT_OT-700chan.ms/table.f19 | |
| ESO137-MeerKAT_OT-700chan.ms/table.f11 | |
| ESO137-MeerKAT_OT-700chan.ms/FLAG_CMD/ | |
| ESO137-MeerKAT_OT-700chan.ms/FLAG_CMD/table.f0 | |
| ESO137-MeerKAT_OT-700chan.ms/FLAG_CMD/table.info | |
| ESO137-MeerKAT_OT-700chan.ms/FLAG_CMD/table.dat | |
| ESO137-MeerKAT_OT-700chan.ms/FLAG_CMD/table.lock | |
| ESO137-MeerKAT_OT-700chan.ms/table.f12 | |
| ESO137-MeerKAT_OT-700chan.ms/table.f14 | |
| ESO137-MeerKAT_OT-700chan.ms/POLARIZATION/ | |
| ESO137-MeerKAT_OT-700chan.ms/POLARIZATION/table.f0 | |
| ESO137-MeerKAT_OT-700chan.ms/POLARIZATION/table.info | |
| ESO137-MeerKAT_OT-700chan.ms/POLARIZATION/table.dat | |
| ESO137-MeerKAT_OT-700chan.ms/POLARIZATION/table.f0i | |
| ESO137-MeerKAT_OT-700chan.ms/POLARIZATION/table.lock | |
| ESO137-MeerKAT_OT-700chan.ms/table.f7 | |
| ESO137-MeerKAT_OT-700chan.ms/table.f20_TSM1 | |
| ESO137-MeerKAT_OT-700chan.ms/table.f16 | |
| ESO137-MeerKAT_OT-700chan.ms/table.f9 | |
| ESO137-MeerKAT_OT-700chan.ms/STATE/ | |
| ESO137-MeerKAT_OT-700chan.ms/STATE/table.f0 | |
| ESO137-MeerKAT_OT-700chan.ms/STATE/table.info | |
| ESO137-MeerKAT_OT-700chan.ms/STATE/table.dat | |
| ESO137-MeerKAT_OT-700chan.ms/STATE/table.lock | |
| ESO137-MeerKAT_OT-700chan.ms/table.f17_TSM1 | |
| ESO137-MeerKAT_OT-700chan.ms/DATA_DESCRIPTION/ | |
| ESO137-MeerKAT_OT-700chan.ms/DATA_DESCRIPTION/table.f0 | |
| ESO137-MeerKAT_OT-700chan.ms/DATA_DESCRIPTION/table.info | |
| ESO137-MeerKAT_OT-700chan.ms/DATA_DESCRIPTION/table.dat | |
| ESO137-MeerKAT_OT-700chan.ms/DATA_DESCRIPTION/table.lock | |
| ESO137-MeerKAT_OT-700chan.ms/table.f13 | |
| ESO137-MeerKAT_OT-700chan.ms/table.f10 | |
| ESO137-MeerKAT_OT-700chan.ms/table.f15 | |
| ESO137-MeerKAT_OT-700chan.ms/table.f20 | |
| ESO137-MeerKAT_OT-700chan.ms/ANTENNA/ | |
| ESO137-MeerKAT_OT-700chan.ms/ANTENNA/table.f0 | |
| ESO137-MeerKAT_OT-700chan.ms/ANTENNA/table.info | |
| ESO137-MeerKAT_OT-700chan.ms/ANTENNA/table.dat | |
| ESO137-MeerKAT_OT-700chan.ms/ANTENNA/table.lock | |
| ESO137-MeerKAT_OT-700chan.ms/table.f6 | |
| ESO137-MeerKAT_OT-700chan.ms/POINTING/ | |
| ESO137-MeerKAT_OT-700chan.ms/POINTING/table.f0 | |
| ESO137-MeerKAT_OT-700chan.ms/POINTING/table.f1 | |
| ESO137-MeerKAT_OT-700chan.ms/POINTING/table.info | |
| ESO137-MeerKAT_OT-700chan.ms/POINTING/table.dat | |
| ESO137-MeerKAT_OT-700chan.ms/POINTING/table.f0i | |
| ESO137-MeerKAT_OT-700chan.ms/POINTING/table.lock | |
| ESO137-MeerKAT_OT-700chan.ms/table.f22_TSM1 | |
| ESO137-MeerKAT_OT-700chan.ms/table.f1 | |
| ESO137-MeerKAT_OT-700chan.ms/table.info | |
| ESO137-MeerKAT_OT-700chan.ms/FIELD/ | |
| ESO137-MeerKAT_OT-700chan.ms/FIELD/table.f0 | |
| ESO137-MeerKAT_OT-700chan.ms/FIELD/table.info | |
| ESO137-MeerKAT_OT-700chan.ms/FIELD/table.dat | |
| ESO137-MeerKAT_OT-700chan.ms/FIELD/table.f0i | |
| ESO137-MeerKAT_OT-700chan.ms/FIELD/table.lock | |
| ESO137-MeerKAT_OT-700chan.ms/PROCESSOR/ | |
| ESO137-MeerKAT_OT-700chan.ms/PROCESSOR/table.f0 | |
| ESO137-MeerKAT_OT-700chan.ms/PROCESSOR/table.info | |
| ESO137-MeerKAT_OT-700chan.ms/PROCESSOR/table.dat | |
| ESO137-MeerKAT_OT-700chan.ms/PROCESSOR/table.lock | |
| ESO137-MeerKAT_OT-700chan.ms/FEED/ | |
| ESO137-MeerKAT_OT-700chan.ms/FEED/table.f0 | |
| ESO137-MeerKAT_OT-700chan.ms/FEED/table.info | |
| ESO137-MeerKAT_OT-700chan.ms/FEED/table.dat | |
| ESO137-MeerKAT_OT-700chan.ms/FEED/table.f0i | |
| ESO137-MeerKAT_OT-700chan.ms/FEED/table.lock | |
| ESO137-MeerKAT_OT-700chan.ms/table.f21_TSM1 | |
| ESO137-MeerKAT_OT-700chan.ms/OBSERVATION/ | |
| ESO137-MeerKAT_OT-700chan.ms/OBSERVATION/table.f0 | |
| ESO137-MeerKAT_OT-700chan.ms/OBSERVATION/table.info | |
| ESO137-MeerKAT_OT-700chan.ms/OBSERVATION/table.dat | |
| ESO137-MeerKAT_OT-700chan.ms/OBSERVATION/table.lock | |
| ESO137-MeerKAT_OT-700chan.ms/table.dat | |
| ESO137-MeerKAT_OT-700chan.ms/table.f2 | |
| ESO137-MeerKAT_OT-700chan.ms/HISTORY/ | |
| ESO137-MeerKAT_OT-700chan.ms/HISTORY/table.f0 | |
| ESO137-MeerKAT_OT-700chan.ms/HISTORY/table.info | |
| ESO137-MeerKAT_OT-700chan.ms/HISTORY/table.dat | |
| ESO137-MeerKAT_OT-700chan.ms/HISTORY/table.lock | |
| ESO137-MeerKAT_OT-700chan.ms/table.f22 | |
| ESO137-MeerKAT_OT-700chan.ms/table.f17 | |
| ESO137-MeerKAT_OT-700chan.ms/table.f8 | |
| ESO137-MeerKAT_OT-700chan.ms/SPECTRAL_WINDOW/ | |
| ESO137-MeerKAT_OT-700chan.ms/SPECTRAL_WINDOW/table.f0 | |
| ESO137-MeerKAT_OT-700chan.ms/SPECTRAL_WINDOW/table.info | |
| ESO137-MeerKAT_OT-700chan.ms/SPECTRAL_WINDOW/table.dat | |
| ESO137-MeerKAT_OT-700chan.ms/SPECTRAL_WINDOW/table.f0i | |
| ESO137-MeerKAT_OT-700chan.ms/SPECTRAL_WINDOW/table.lock | |
| ESO137-MeerKAT_OT-700chan.ms/table.f4 | |
| ESO137-MeerKAT_OT-700chan.ms/table.f3 | |
| ESO137-MeerKAT_OT-700chan.ms/table.f5 | |
| ESO137-MeerKAT_OT-700chan.ms/table.f19_TSM0 | |
| ESO137-MeerKAT_OT-700chan.ms/SOURCE/ | |
| ESO137-MeerKAT_OT-700chan.ms/SOURCE/table.f0 | |
| ESO137-MeerKAT_OT-700chan.ms/SOURCE/table.info | |
| ESO137-MeerKAT_OT-700chan.ms/SOURCE/table.dat | |
| ESO137-MeerKAT_OT-700chan.ms/SOURCE/table.f0i | |
| ESO137-MeerKAT_OT-700chan.ms/SOURCE/table.lock | |
| ESO137-MeerKAT_OT-700chan.ms/table.lock | |
| ESO137-MeerKAT_OT-700chan.ms/table.f18 | |
| ESO137-MeerKAT_OT-700chan.ms/table.f21 | |
| [1;30mINFO[0m [job untar] Max memory used: 3MiB | |
| [1;30mINFO[0m [job untar] completed success | |
| [1;30mINFO[0m [step untar] completed success | |
| [1;30mINFO[0m [workflow ] starting step casa_listobs | |
| [1;30mINFO[0m [step casa_listobs] start | |
| [1;30mINFO[0m [job casa_listobs] Output of job will be cached in /vault-ike/gijs/buis/scratch/cache/e9f276759442776ee755568e3b22ef9f | |
| [1;30mINFO[0m Using local copy of Singularity image found in /vault-ike/gijs/buis | |
| [1;30mINFO[0m [job casa_listobs] /vault-ike/gijs/buis/scratch/cache/e9f276759442776ee755568e3b22ef9f$ singularity \ | |
| --quiet \ | |
| exec \ | |
| --contain \ | |
| --pid \ | |
| --ipc \ | |
| --bind \ | |
| /vault-ike/gijs/buis/scratch/cache/e9f276759442776ee755568e3b22ef9f:/evWsTK:rw \ | |
| --bind \ | |
| /vault-ike/gijs/buis/scratch/workflow/7/worktw0btjf_:/tmp:rw \ | |
| --pwd \ | |
| /evWsTK \ | |
| /vault-ike/gijs/buis/stimela_casa:1.2.0.img \ | |
| python \ | |
| -c \ | |
| 'from __future__ import print_function | |
| import Crasa.Crasa as crasa | |
| import sys | |
| # JavaScript uses lowercase for bools | |
| true = True | |
| false = False | |
| null = None | |
| args = {"listfile": "obsinfo.txt", "vis": "/evWsTK/ESO137-MeerKAT_OT-700chan.ms"} | |
| print(args, file=sys.stderr) | |
| task = crasa.CasaTask("listobs", **args) | |
| task.run()' | |
| {'vis': '/evWsTK/ESO137-MeerKAT_OT-700chan.ms', 'listfile': 'obsinfo.txt'} | |
| ========================================= | |
| The start-up time of CASA may vary | |
| depending on whether the shared libraries | |
| are cached or not. | |
| ========================================= | |
| IPython 5.1.0 -- An enhanced Interactive Python. | |
| CASA 5.6.0-60 -- Common Astronomy Software Applications | |
| Creating a new telemetry file | |
| Telemetry initialized. Telemetry will send anonymized usage statistics to NRAO. | |
| You can disable telemetry by adding the following line to your ~/.casarc file: | |
| EnableTelemetry: False | |
| 2020-01-21 19:41:11 INFO ::casa CASA Version 5.6.0-60 | |
| --> CrashReporter initialized. | |
| 2020-01-21 19:41:14 INFO listobs:::: | |
| 2020-01-21 19:41:14 INFO listobs::::+ ########################################## | |
| 2020-01-21 19:41:14 INFO listobs::::+ ##### Begin Task: listobs ##### | |
| 2020-01-21 19:41:14 INFO listobs:::: listobs(vis="/evWsTK/ESO137-MeerKAT_OT-700chan.ms",selectdata=True,spw="",field="",antenna="", | |
| 2020-01-21 19:41:14 INFO listobs::::+ uvrange="",timerange="",correlation="",scan="",intent="", | |
| 2020-01-21 19:41:14 INFO listobs::::+ feed="",array="",observation="",verbose=True,listfile="obsinfo.txt", | |
| 2020-01-21 19:41:14 INFO listobs::::+ listunfl=False,cachesize=50,overwrite=False) | |
| 2020-01-21 19:41:14 INFO listobs::ms::summary Writing output to file: obsinfo.txt | |
| 2020-01-21 19:41:14 INFO listobs::MSMetaData::_computeScanAndSubScanProperties Computing scan and subscan properties... | |
| 2020-01-21 19:41:15 INFO listobs:::: ##### End Task: listobs ##### | |
| 2020-01-21 19:41:15 INFO listobs::::+ ########################################## | |
| [1;30mINFO[0m [job casa_listobs] completed success | |
| [1;30mINFO[0m [step casa_listobs] completed success | |
| [1;30mINFO[0m [workflow ] starting step casa_setjy | |
| [1;30mINFO[0m [step casa_setjy] start | |
| [1;30mINFO[0m [job casa_setjy] Output of job will be cached in /vault-ike/gijs/buis/scratch/cache/63c8d38f9ff2fe17acca29d14d39b6c0 | |
| [1;30mINFO[0m Using local copy of Singularity image found in /vault-ike/gijs/buis | |
| [1;30mINFO[0m [job casa_setjy] /vault-ike/gijs/buis/scratch/cache/63c8d38f9ff2fe17acca29d14d39b6c0$ singularity \ | |
| --quiet \ | |
| exec \ | |
| --contain \ | |
| --pid \ | |
| --ipc \ | |
| --bind \ | |
| /vault-ike/gijs/buis/scratch/cache/63c8d38f9ff2fe17acca29d14d39b6c0:/evWsTK:rw \ | |
| --bind \ | |
| /vault-ike/gijs/buis/scratch/workflow/7/workiekdhbqa:/tmp:rw \ | |
| --pwd \ | |
| /evWsTK \ | |
| /vault-ike/gijs/buis/stimela_casa:1.2.0.img \ | |
| python \ | |
| -c \ | |
| 'from __future__ import print_function | |
| import Crasa.Crasa as crasa | |
| import sys | |
| # JavaScript uses lowercase for bools | |
| true = True | |
| false = False | |
| null = None | |
| args = {"field": "J1939-6342", "interpolation": "nearest", "scalebychan": true, "standard": "Perley-Butler 2010", "usescratch": true, "vis": "/evWsTK/ESO137-MeerKAT_OT-700chan.ms"} | |
| task = crasa.CasaTask("setjy", **args) | |
| task.run()' | |
| ========================================= | |
| The start-up time of CASA may vary | |
| depending on whether the shared libraries | |
| are cached or not. | |
| ========================================= | |
| IPython 5.1.0 -- An enhanced Interactive Python. | |
| CASA 5.6.0-60 -- Common Astronomy Software Applications | |
| Creating a new telemetry file | |
| Telemetry initialized. Telemetry will send anonymized usage statistics to NRAO. | |
| You can disable telemetry by adding the following line to your ~/.casarc file: | |
| EnableTelemetry: False | |
| 2020-01-21 19:44:26 INFO ::casa CASA Version 5.6.0-60 | |
| --> CrashReporter initialized. | |
| 2020-01-21 19:44:29 INFO setjy:::: | |
| 2020-01-21 19:44:29 INFO setjy::::+ ########################################## | |
| 2020-01-21 19:44:29 INFO setjy::::+ ##### Begin Task: setjy ##### | |
| 2020-01-21 19:44:29 INFO setjy:::: setjy(vis="/evWsTK/ESO137-MeerKAT_OT-700chan.ms",field="J1939-6342",spw="",selectdata=False,timerange="", | |
| 2020-01-21 19:44:29 INFO setjy::::+ scan="",intent="",observation="",scalebychan=True,standard="Perley-Butler 2010", | |
| 2020-01-21 19:44:29 INFO setjy::::+ model="",modimage="",listmodels=False,fluxdensity=-1,spix=0.0, | |
| 2020-01-21 19:44:29 INFO setjy::::+ reffreq="1GHz",polindex=[],polangle=[],rotmeas=0.0,fluxdict={}, | |
| 2020-01-21 19:44:29 INFO setjy::::+ useephemdir=False,interpolation="nearest",usescratch=True,ismms=False) | |
| 2020-01-21 19:44:29 INFO setjy:::: {'field': 'J1939-6342'} | |
| 2020-01-21 19:44:29 INFO Imager::open() Opening MeasurementSet /evWsTK/ESO137-MeerKAT_OT-700chan.ms | |
| 2020-01-21 19:44:29 INFO Clearing all model records in MS header. | |
| 2020-01-21 19:44:29 INFO VisSetUtil::addScrCols Adding MODEL_DATA column(s). | |
| 2020-01-21 19:46:52 INFO VisSetUtil::initScrCols Initializing MODEL_DATA to (unity). | |
| 2020-01-21 19:51:55 INFO VisSetUtil::initScrCols Initialized 6080894 rows. | |
| 2020-01-21 19:51:55 INFO Clearing all model records in MS header. | |
| 2020-01-21 19:51:58 INFO setjy:::: CASA Version 5.6.0-60 | |
| 2020-01-21 19:51:58 INFO setjy:::: | |
| 2020-01-21 19:51:58 INFO imager::setjy() Using channel dependent flux densities | |
| 2020-01-21 19:51:58 INFO Clearing all model records in MS header. | |
| 2020-01-21 19:51:59 INFO imager::data selection Selected 692955 out of 6080894 rows. | |
| 2020-01-21 19:51:59 INFO imager::setjy() J1939-6342 (fld ind 0) spw 0 [I=14.85, Q=0, U=0, V=0] Jy @ 1.0127e+09Hz, (Perley-Butler 2010) | |
| 2020-01-21 19:51:59 INFO Clearing all model records in MS header. | |
| 2020-01-21 19:51:59 INFO imager::data selection Selected 692955 out of 6080894 rows. | |
| 2020-01-21 19:51:59 INFO imager::ft() Fourier transforming: replacing MODEL_DATA column | |
| 2020-01-21 19:51:59 INFO imager::createSkyEquation() Processing after subtracting componentlist /evWsTK/ESO137-MeerKAT_OT-700chan.ms_setjy_spw0_J1939-6342_1.01274GHz58612d.cl | |
| 2020-01-21 19:51:59 INFO imager::createFTMachine() Performing interferometric gridding... | |
| 2020-01-21 19:52:43 INFO setjy:::: ##### End Task: setjy ##### | |
| 2020-01-21 19:52:43 INFO setjy::::+ ########################################## | |
| [1;30mINFO[0m [job casa_setjy] completed success | |
| [1;30mINFO[0m [step casa_setjy] completed success | |
| [1;30mINFO[0m [workflow ] starting step casa_gaincal | |
| [1;30mINFO[0m [step casa_gaincal] start | |
| [1;30mINFO[0m [job casa_gaincal] Output of job will be cached in /vault-ike/gijs/buis/scratch/cache/e9018f8863b344e0f3fe21737456c476 | |
| [1;30mINFO[0m Using local copy of Singularity image found in /vault-ike/gijs/buis | |
| [1;30mINFO[0m [job casa_gaincal] /vault-ike/gijs/buis/scratch/cache/e9018f8863b344e0f3fe21737456c476$ singularity \ | |
| --quiet \ | |
| exec \ | |
| --contain \ | |
| --pid \ | |
| --ipc \ | |
| --bind \ | |
| /vault-ike/gijs/buis/scratch/cache/e9018f8863b344e0f3fe21737456c476:/evWsTK:rw \ | |
| --bind \ | |
| /vault-ike/gijs/buis/scratch/workflow/7/workjrsqzece:/tmp:rw \ | |
| --pwd \ | |
| /evWsTK \ | |
| /vault-ike/gijs/buis/stimela_casa:1.2.0.img \ | |
| python \ | |
| -c \ | |
| 'from __future__ import print_function | |
| import Crasa.Crasa as crasa | |
| import sys | |
| # JavaScript uses lowercase for bools | |
| true = True | |
| false = False | |
| null = None | |
| args = {"calmode": "ap", "caltable": "gaintable.K0", "field": "J1939-6342", "gaintype": "K", "refant": "m048", "solint": "inf", "uvrange": ">300m", "vis": "/evWsTK/ESO137-MeerKAT_OT-700chan.ms"} | |
| gaintables = args.pop("gaintable_list", None) | |
| if gaintables: | |
| for i, gaintable in enumerate(gaintables): | |
| if isinstance(gaintable, dict): | |
| gaintables[i] = gaintable["path"] | |
| args["gaintable"] = gaintables | |
| caltable = args.get("caltable_append", None) | |
| print(args) | |
| if caltable: | |
| args["caltable"] = caltable | |
| task = crasa.CasaTask("gaincal", **args) | |
| task.run()' | |
| ========================================= | |
| The start-up time of CASA may vary | |
| depending on whether the shared libraries | |
| are cached or not. | |
| ========================================= | |
| IPython 5.1.0 -- An enhanced Interactive Python. | |
| CASA 5.6.0-60 -- Common Astronomy Software Applications | |
| Creating a new telemetry file | |
| Telemetry initialized. Telemetry will send anonymized usage statistics to NRAO. | |
| You can disable telemetry by adding the following line to your ~/.casarc file: | |
| EnableTelemetry: False | |
| 2020-01-21 19:55:57 INFO ::casa CASA Version 5.6.0-60 | |
| --> CrashReporter initialized. | |
| 2020-01-21 19:55:59 INFO gaincal:::: | |
| 2020-01-21 19:55:59 INFO gaincal::::+ ########################################## | |
| 2020-01-21 19:55:59 INFO gaincal::::+ ##### Begin Task: gaincal ##### | |
| 2020-01-21 19:55:59 INFO gaincal:::: gaincal(vis="/evWsTK/ESO137-MeerKAT_OT-700chan.ms",caltable="gaintable.K0",field="J1939-6342",spw="",intent="", | |
| 2020-01-21 19:55:59 INFO gaincal::::+ selectdata=True,timerange="",uvrange=">300m",antenna="",scan="", | |
| 2020-01-21 19:55:59 INFO gaincal::::+ observation="",msselect="",solint="inf",combine="",preavg=-1.0, | |
| 2020-01-21 19:55:59 INFO gaincal::::+ refant="m048",refantmode="flex",minblperant=4,minsnr=3.0,solnorm=False, | |
| 2020-01-21 19:55:59 INFO gaincal::::+ normtype="mean",gaintype="K",smodel=[],calmode="ap",solmode="", | |
| 2020-01-21 19:55:59 INFO gaincal::::+ rmsthresh=[],append=False,splinetime=3600.0,npointaver=3,phasewrap=180.0, | |
| 2020-01-21 19:55:59 INFO gaincal::::+ docallib=False,callib="",gaintable=[''],gainfield=[''],interp=[], | |
| 2020-01-21 19:55:59 INFO gaincal::::+ spwmap=[],parang=False) | |
| 2020-01-21 19:55:59 INFO gaincal::calibrater::open ****Using NEW VI2-driven calibrater tool**** | |
| 2020-01-21 19:55:59 INFO gaincal::calibrater::open Opening MS: /evWsTK/ESO137-MeerKAT_OT-700chan.ms for calibration. | |
| 2020-01-21 19:55:59 INFO gaincal::Calibrater:: Initializing nominal selection to the whole MS. | |
| 2020-01-21 19:55:59 INFO gaincal:::: NB: gaincal automatically excludes auto-correlations. | |
| 2020-01-21 19:55:59 INFO calibrater::setdata Beginning selectvis--(MSSelection version)------- | |
| 2020-01-21 19:55:59 INFO calibrater::reset Reseting solve/apply state | |
| 2020-01-21 19:55:59 INFO Calibrater::selectvis Performing selection on MeasurementSet | |
| 2020-01-21 19:55:59 INFO Calibrater::selectvis+ Selecting on field: 'J1939-6342' | |
| 2020-01-21 19:55:59 INFO Calibrater::selectvis+ Selecting on uvrange: '>300m' | |
| 2020-01-21 19:55:59 INFO Calibrater::selectvis+ Selecting with TaQL: 'ANTENNA1!=ANTENNA2' | |
| 2020-01-21 19:56:01 INFO Calibrater::selectvis By selection 6080894 rows are reduced to 525564 | |
| 2020-01-21 19:56:01 INFO Calibrater::selectvis Frequency selection: Selecting all channels in all spws. | |
| 2020-01-21 19:56:01 INFO calibrater::setdata chanmode=none nchan=1 start=0 step=1 mStart='0km/s' mStep='0km/s' msSelect='ANTENNA1!=ANTENNA2' | |
| 2020-01-21 19:56:01 INFO calibrater::setsolve Beginning setsolve--(MSSelection version)------- | |
| 2020-01-21 19:56:01 INFO Calibrater::setsolve Arranging to SOLVE: | |
| 2020-01-21 19:56:01 INFO Calibrater::setsolve . K Jones: table=gaintable.K0 append=false solint=inf refantmode='flex' refant='m048' minsnr=3 apmode=AP solnorm=false | |
| 2020-01-21 19:56:01 INFO calibrater::solve Beginning solve----------------------------- | |
| 2020-01-21 19:56:01 INFO Calibrater::solve The following calibration terms are arranged for apply: | |
| 2020-01-21 19:56:01 INFO Calibrater::solve . (None) | |
| 2020-01-21 19:56:01 INFO Calibrater::solve The following calibration term is arranged for solve: | |
| 2020-01-21 19:56:01 INFO Calibrater::solve . K Jones: table=gaintable.K0 append=false solint=inf refantmode='flex' refant='m048' minsnr=3 apmode=AP solnorm=false | |
| 2020-01-21 19:56:02 INFO Calibrater::solve For solint = inf, found 8 solution intervals. | |
| 2020-01-21 19:56:11 SEVERE MeasTable::dUTC(Double) (file ../../measures/Measures/MeasTable.cc, line 4290) Leap second table TAI_UTC seems out-of-date. | |
| 2020-01-21 19:56:11 SEVERE MeasTable::dUTC(Double) (file ../../measures/Measures/MeasTable.cc, line 4290)+ Until the table is updated (see the CASA documentation or your system admin), | |
| 2020-01-21 19:56:11 SEVERE MeasTable::dUTC(Double) (file ../../measures/Measures/MeasTable.cc, line 4290)+ times and coordinates derived from UTC could be wrong by 1s or more. | |
| Found no unflagged data at: (time=2019/05/08/20:36:19.3 field=0 spw=0 chan=0) | |
| Found no unflagged data at: (time=2019/05/08/21:43:22.0 field=0 spw=0 chan=0) | |
| Found no unflagged data at: (time=2019/05/08/22:51:24.0 field=0 spw=0 chan=0) | |
| Found no unflagged data at: (time=2019/05/08/23:59:18.1 field=0 spw=0 chan=0) | |
| Found no unflagged data at: (time=2019/05/09/01:06:48.3 field=0 spw=0 chan=0) | |
| Found no unflagged data at: (time=2019/05/09/02:14:22.4 field=0 spw=0 chan=0) | |
| Found no unflagged data at: (time=2019/05/09/03:21:52.7 field=0 spw=0 chan=0) | |
| Found no unflagged data at: (time=2019/05/09/04:29:42.8 field=0 spw=0 chan=0) | |
| 2020-01-21 19:57:26 INFO Calibrater::solve Found good K Jones solutions in 0 solution intervals. | |
| 2020-01-21 19:57:26 WARN Calibrater::solve Spectral window(s) 0, | |
| 2020-01-21 19:57:26 WARN Calibrater::solve+ could not be solved due to missing (pre-)calibration | |
| 2020-01-21 19:57:26 WARN Calibrater::solve+ in one or more of the specified tables. | |
| 2020-01-21 19:57:26 WARN Calibrater::solve+ Please check your results carefully! | |
| 2020-01-21 19:57:26 INFO Calibrater::solve No output calibration table written. | |
| 2020-01-21 19:57:26 INFO calibrater::solve Finished solving. | |
| 2020-01-21 19:57:26 INFO gaincal:::: Calibration solve statistics per spw: (expected/attempted/succeeded): | |
| 2020-01-21 19:57:26 INFO gaincal:::: Spw 0: 8/0/0 | |
| 2020-01-21 19:57:26 INFO gaincal:::: ##### End Task: gaincal ##### | |
| 2020-01-21 19:57:26 INFO gaincal::::+ ########################################## | |
| {'field': 'J1939-6342', 'calmode': 'ap', 'vis': '/evWsTK/ESO137-MeerKAT_OT-700chan.ms', 'gaintype': 'K', 'caltable': 'gaintable.K0', 'solint': 'inf', 'refant': 'm048', 'uvrange': '>300m'} | |
| [1;30mERROR[0m [31m[job casa_gaincal] Job error: | |
| ("Error collecting output for parameter 'caltable_out':\nscratch/repo/5/cwlfiles/casa_gaincal.cwl:176:7: Did not find output file with glob pattern: '['gaintable.K0']'", {})[0m | |
| [1;30mWARNING[0m [33m[job casa_gaincal] completed permanentFail[0m | |
| [1;30mERROR[0m [31m[step casa_gaincal] Output is missing expected field file:///vault-ike/gijs/buis/scratch/repo/5/1GC-pipeline.cwl#casa_gaincal/caltable_append_out[0m | |
| [1;30mERROR[0m [31m[step casa_gaincal] Output is missing expected field file:///vault-ike/gijs/buis/scratch/repo/5/1GC-pipeline.cwl#casa_gaincal/caltable_out[0m | |
| [1;30mERROR[0m [31m[step casa_gaincal] Output is missing expected field file:///vault-ike/gijs/buis/scratch/repo/5/1GC-pipeline.cwl#casa_gaincal/vis_out[0m | |
| [1;30mWARNING[0m [33m[step casa_gaincal] completed permanentFail[0m | |
| [1;30mINFO[0m [workflow ] completed permanentFail | |
| [1;30mWARNING[0m [33mFinal process status is permanentFail[0m |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment