Created
October 14, 2021 19:52
-
-
Save gmarkall/353d7e164d39adf13822a3ec612fd048 to your computer and use it in GitHub Desktop.
Running test_ufuncs under valgrind with NumPy 1.21 and Numba PR #7483
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| $ PYTHONMALLOC=malloc valgrind-numba python -m numba.runtests numba.tests.test_ufuncs | |
| ==7578== Memcheck, a memory error detector | |
| ==7578== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. | |
| ==7578== Using Valgrind-3.17.0 and LibVEX; rerun with -h for copyright info | |
| ==7578== Command: python -m numba.runtests numba.tests.test_ufuncs | |
| ==7578== | |
| ==7579== Warning: invalid file descriptor 1024 in syscall close() | |
| ==7579== Warning: invalid file descriptor 1025 in syscall close() | |
| ==7579== Warning: invalid file descriptor 1026 in syscall close() | |
| ==7579== Warning: invalid file descriptor 1027 in syscall close() | |
| ==7579== Use --log-fd=<number> to select an alternative log fd. | |
| ==7579== Warning: invalid file descriptor 1028 in syscall close() | |
| ==7579== Warning: invalid file descriptor 1029 in syscall close() | |
| ==7580== Warning: invalid file descriptor 1024 in syscall close() | |
| ==7580== Warning: invalid file descriptor 1025 in syscall close() | |
| ==7580== Warning: invalid file descriptor 1026 in syscall close() | |
| ==7580== Warning: invalid file descriptor 1027 in syscall close() | |
| ==7580== Use --log-fd=<number> to select an alternative log fd. | |
| ==7580== Warning: invalid file descriptor 1028 in syscall close() | |
| ==7580== Warning: invalid file descriptor 1029 in syscall close() | |
| ==7581== Warning: invalid file descriptor 1024 in syscall close() | |
| ==7581== Warning: invalid file descriptor 1025 in syscall close() | |
| ==7581== Warning: invalid file descriptor 1026 in syscall close() | |
| ==7581== Warning: invalid file descriptor 1027 in syscall close() | |
| ==7581== Use --log-fd=<number> to select an alternative log fd. | |
| ==7581== Warning: invalid file descriptor 1028 in syscall close() | |
| ==7581== Warning: invalid file descriptor 1029 in syscall close() | |
| ==7583== Warning: invalid file descriptor 1024 in syscall close() | |
| ==7583== Warning: invalid file descriptor 1025 in syscall close() | |
| ==7583== Warning: invalid file descriptor 1026 in syscall close() | |
| ==7583== Warning: invalid file descriptor 1027 in syscall close() | |
| ==7583== Use --log-fd=<number> to select an alternative log fd. | |
| ==7583== Warning: invalid file descriptor 1028 in syscall close() | |
| ==7583== Warning: invalid file descriptor 1029 in syscall close() | |
| NUMBA_DEFAULT_NUM_THREADS | |
| ==7578== Conditional jump or move depends on uninitialised value(s) | |
| ==7578== at 0xF51DA00: _INTERNALf40e91f8::__kmp::init_dl_data() (in /home/gmarkall/miniconda3/envs/numbanp121/lib/libiomp5.so) | |
| ==7578== by 0xF51D95A: __kmp::init_dynamic_link_data() (in /home/gmarkall/miniconda3/envs/numbanp121/lib/libiomp5.so) | |
| ==7578== by 0x40108D2: call_init (dl-init.c:72) | |
| ==7578== by 0x40108D2: _dl_init (dl-init.c:119) | |
| ==7578== by 0x401539E: dl_open_worker (dl-open.c:522) | |
| ==7578== by 0x596F1EE: _dl_catch_exception (dl-error-skeleton.c:196) | |
| ==7578== by 0x4014969: _dl_open (dl-open.c:605) | |
| ==7578== by 0x4E44F95: dlopen_doit (dlopen.c:66) | |
| ==7578== by 0x596F1EE: _dl_catch_exception (dl-error-skeleton.c:196) | |
| ==7578== by 0x596F27E: _dl_catch_error (dl-error-skeleton.c:215) | |
| ==7578== by 0x4E45744: _dlerror_run (dlerror.c:162) | |
| ==7578== by 0x4E45050: dlopen@@GLIBC_2.2.5 (dlopen.c:87) | |
| ==7578== by 0x421F3C4: PyInit__mklinit (in /home/gmarkall/miniconda3/envs/numbanp121/lib/python3.9/site-packages/mkl/_mklinit.cpython-39-x86_64-linux-gnu.so) | |
| ==7578== | |
| ==7578== Conditional jump or move depends on uninitialised value(s) | |
| ==7578== at 0xF51DA16: _INTERNALf40e91f8::__kmp::init_dl_data() (in /home/gmarkall/miniconda3/envs/numbanp121/lib/libiomp5.so) | |
| ==7578== by 0xF51D95A: __kmp::init_dynamic_link_data() (in /home/gmarkall/miniconda3/envs/numbanp121/lib/libiomp5.so) | |
| ==7578== by 0x40108D2: call_init (dl-init.c:72) | |
| ==7578== by 0x40108D2: _dl_init (dl-init.c:119) | |
| ==7578== by 0x401539E: dl_open_worker (dl-open.c:522) | |
| ==7578== by 0x596F1EE: _dl_catch_exception (dl-error-skeleton.c:196) | |
| ==7578== by 0x4014969: _dl_open (dl-open.c:605) | |
| ==7578== by 0x4E44F95: dlopen_doit (dlopen.c:66) | |
| ==7578== by 0x596F1EE: _dl_catch_exception (dl-error-skeleton.c:196) | |
| ==7578== by 0x596F27E: _dl_catch_error (dl-error-skeleton.c:215) | |
| ==7578== by 0x4E45744: _dlerror_run (dlerror.c:162) | |
| ==7578== by 0x4E45050: dlopen@@GLIBC_2.2.5 (dlopen.c:87) | |
| ==7578== by 0x421F3C4: PyInit__mklinit (in /home/gmarkall/miniconda3/envs/numbanp121/lib/python3.9/site-packages/mkl/_mklinit.cpython-39-x86_64-linux-gnu.so) | |
| ==7578== | |
| ==7578== Conditional jump or move depends on uninitialised value(s) | |
| ==7578== at 0x4C39383: __strncpy_sse2_unaligned (vg_replace_strmem.c:567) | |
| ==7578== by 0xF51DA95: _INTERNALf40e91f8::__kmp::init_dl_data() (in /home/gmarkall/miniconda3/envs/numbanp121/lib/libiomp5.so) | |
| ==7578== by 0xF51D95A: __kmp::init_dynamic_link_data() (in /home/gmarkall/miniconda3/envs/numbanp121/lib/libiomp5.so) | |
| ==7578== by 0x40108D2: call_init (dl-init.c:72) | |
| ==7578== by 0x40108D2: _dl_init (dl-init.c:119) | |
| ==7578== by 0x401539E: dl_open_worker (dl-open.c:522) | |
| ==7578== by 0x596F1EE: _dl_catch_exception (dl-error-skeleton.c:196) | |
| ==7578== by 0x4014969: _dl_open (dl-open.c:605) | |
| ==7578== by 0x4E44F95: dlopen_doit (dlopen.c:66) | |
| ==7578== by 0x596F1EE: _dl_catch_exception (dl-error-skeleton.c:196) | |
| ==7578== by 0x596F27E: _dl_catch_error (dl-error-skeleton.c:215) | |
| ==7578== by 0x4E45744: _dlerror_run (dlerror.c:162) | |
| ==7578== by 0x4E45050: dlopen@@GLIBC_2.2.5 (dlopen.c:87) | |
| ==7578== | |
| ==7578== Conditional jump or move depends on uninitialised value(s) | |
| ==7578== at 0x4C393C9: __strncpy_sse2_unaligned (vg_replace_strmem.c:567) | |
| ==7578== by 0xF51DA95: _INTERNALf40e91f8::__kmp::init_dl_data() (in /home/gmarkall/miniconda3/envs/numbanp121/lib/libiomp5.so) | |
| ==7578== by 0xF51D95A: __kmp::init_dynamic_link_data() (in /home/gmarkall/miniconda3/envs/numbanp121/lib/libiomp5.so) | |
| ==7578== by 0x40108D2: call_init (dl-init.c:72) | |
| ==7578== by 0x40108D2: _dl_init (dl-init.c:119) | |
| ==7578== by 0x401539E: dl_open_worker (dl-open.c:522) | |
| ==7578== by 0x596F1EE: _dl_catch_exception (dl-error-skeleton.c:196) | |
| ==7578== by 0x4014969: _dl_open (dl-open.c:605) | |
| ==7578== by 0x4E44F95: dlopen_doit (dlopen.c:66) | |
| ==7578== by 0x596F1EE: _dl_catch_exception (dl-error-skeleton.c:196) | |
| ==7578== by 0x596F27E: _dl_catch_error (dl-error-skeleton.c:215) | |
| ==7578== by 0x4E45744: _dlerror_run (dlerror.c:162) | |
| ==7578== by 0x4E45050: dlopen@@GLIBC_2.2.5 (dlopen.c:87) | |
| ==7578== | |
| ==7578== Conditional jump or move depends on uninitialised value(s) | |
| ==7578== at 0x4C3940D: __strncpy_sse2_unaligned (vg_replace_strmem.c:567) | |
| ==7578== by 0xF51DA95: _INTERNALf40e91f8::__kmp::init_dl_data() (in /home/gmarkall/miniconda3/envs/numbanp121/lib/libiomp5.so) | |
| ==7578== by 0xF51D95A: __kmp::init_dynamic_link_data() (in /home/gmarkall/miniconda3/envs/numbanp121/lib/libiomp5.so) | |
| ==7578== by 0x40108D2: call_init (dl-init.c:72) | |
| ==7578== by 0x40108D2: _dl_init (dl-init.c:119) | |
| ==7578== by 0x401539E: dl_open_worker (dl-open.c:522) | |
| ==7578== by 0x596F1EE: _dl_catch_exception (dl-error-skeleton.c:196) | |
| ==7578== by 0x4014969: _dl_open (dl-open.c:605) | |
| ==7578== by 0x4E44F95: dlopen_doit (dlopen.c:66) | |
| ==7578== by 0x596F1EE: _dl_catch_exception (dl-error-skeleton.c:196) | |
| ==7578== by 0x596F27E: _dl_catch_error (dl-error-skeleton.c:215) | |
| ==7578== by 0x4E45744: _dlerror_run (dlerror.c:162) | |
| ==7578== by 0x4E45050: dlopen@@GLIBC_2.2.5 (dlopen.c:87) | |
| ==7578== | |
| ==7578== Use of uninitialised value of size 8 | |
| ==7578== at 0xF51DAA4: _INTERNALf40e91f8::__kmp::init_dl_data() (in /home/gmarkall/miniconda3/envs/numbanp121/lib/libiomp5.so) | |
| ==7578== by 0xF51D95A: __kmp::init_dynamic_link_data() (in /home/gmarkall/miniconda3/envs/numbanp121/lib/libiomp5.so) | |
| ==7578== by 0x40108D2: call_init (dl-init.c:72) | |
| ==7578== by 0x40108D2: _dl_init (dl-init.c:119) | |
| ==7578== by 0x401539E: dl_open_worker (dl-open.c:522) | |
| ==7578== by 0x596F1EE: _dl_catch_exception (dl-error-skeleton.c:196) | |
| ==7578== by 0x4014969: _dl_open (dl-open.c:605) | |
| ==7578== by 0x4E44F95: dlopen_doit (dlopen.c:66) | |
| ==7578== by 0x596F1EE: _dl_catch_exception (dl-error-skeleton.c:196) | |
| ==7578== by 0x596F27E: _dl_catch_error (dl-error-skeleton.c:215) | |
| ==7578== by 0x4E45744: _dlerror_run (dlerror.c:162) | |
| ==7578== by 0x4E45050: dlopen@@GLIBC_2.2.5 (dlopen.c:87) | |
| ==7578== by 0x421F3C4: PyInit__mklinit (in /home/gmarkall/miniconda3/envs/numbanp121/lib/python3.9/site-packages/mkl/_mklinit.cpython-39-x86_64-linux-gnu.so) | |
| ==7578== | |
| ==7600== Warning: invalid file descriptor 1024 in syscall close() | |
| ==7600== Warning: invalid file descriptor 1025 in syscall close() | |
| ==7600== Warning: invalid file descriptor 1026 in syscall close() | |
| ==7600== Warning: invalid file descriptor 1027 in syscall close() | |
| ==7600== Use --log-fd=<number> to select an alternative log fd. | |
| ==7600== Warning: invalid file descriptor 1028 in syscall close() | |
| ==7600== Warning: invalid file descriptor 1029 in syscall close() | |
| ==7601== Warning: invalid file descriptor 1024 in syscall close() | |
| ==7601== Warning: invalid file descriptor 1025 in syscall close() | |
| ==7601== Warning: invalid file descriptor 1026 in syscall close() | |
| ==7601== Warning: invalid file descriptor 1027 in syscall close() | |
| ==7601== Use --log-fd=<number> to select an alternative log fd. | |
| ==7601== Warning: invalid file descriptor 1028 in syscall close() | |
| ==7601== Warning: invalid file descriptor 1029 in syscall close() | |
| ==7603== Warning: invalid file descriptor 1024 in syscall close() | |
| ==7603== Warning: invalid file descriptor 1025 in syscall close() | |
| ==7603== Warning: invalid file descriptor 1026 in syscall close() | |
| ==7603== Warning: invalid file descriptor 1027 in syscall close() | |
| ==7603== Use --log-fd=<number> to select an alternative log fd. | |
| ==7603== Warning: invalid file descriptor 1028 in syscall close() | |
| ==7603== Warning: invalid file descriptor 1029 in syscall close() | |
| ==7606== Warning: invalid file descriptor 1024 in syscall close() | |
| ==7606== Warning: invalid file descriptor 1025 in syscall close() | |
| ==7606== Warning: invalid file descriptor 1026 in syscall close() | |
| ==7606== Warning: invalid file descriptor 1027 in syscall close() | |
| ==7606== Use --log-fd=<number> to select an alternative log fd. | |
| ==7606== Warning: invalid file descriptor 1028 in syscall close() | |
| ==7606== Warning: invalid file descriptor 1029 in syscall close() | |
| ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | |
| ---------------------------------------------------------------------- | |
| Ran 4118 tests in 12052.201s | |
| OK | |
| ==7578== | |
| ==7578== HEAP SUMMARY: | |
| ==7578== in use at exit: 1,368,102,683 bytes in 16,982,050 blocks | |
| ==7578== total heap usage: 411,896,506 allocs, 394,914,456 frees, 64,118,312,690 bytes allocated | |
| ==7578== | |
| ==7578== LEAK SUMMARY: | |
| ==7578== definitely lost: 141,582 bytes in 1,180 blocks | |
| ==7578== indirectly lost: 1,870,438 bytes in 9,066 blocks | |
| ==7578== possibly lost: 78,444,516 bytes in 585,563 blocks | |
| ==7578== still reachable: 1,287,641,050 bytes in 16,386,237 blocks | |
| ==7578== of which reachable via heuristic: | |
| ==7578== newarray : 6,205 bytes in 53 blocks | |
| ==7578== multipleinheritance: 1,022,600 bytes in 1,205 blocks | |
| ==7578== suppressed: 5,097 bytes in 4 blocks | |
| ==7578== Rerun with --leak-check=full to see details of leaked memory | |
| ==7578== | |
| ==7578== Use --track-origins=yes to see where uninitialised values come from | |
| ==7578== For lists of detected and suppressed errors, rerun with: -s | |
| ==7578== ERROR SUMMARY: 88 errors from 6 contexts (suppressed: 0 from 0) |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment