gwbischof

import argparse
import pymongo
import sys


def update_resource_spec(mongo_uri, resource_uid, new_spec, wet_run):
    client = MongoClient(mongo_uri)
    collection = client.get_database()["resource"]
    print(f"Updating resource spec {'(dry_run)' if not wet_run else ''}")

gwbischof

1. Checkout lemmy:sso-support branch

# Switch to privacyguard:sso_support branch.
cd lemmy
git remote add privacyguard [email protected]:privacyportal/lemmy.git
git fetch --all
git switch sso_support
git submodule init && git submodule update --remote

gwbischof

Serverless Bluesky Queue Concept

Create a RunEngine and a Scheduler

import sched
import time

from bluesky import RunEngine
from ophyd.sim import noisy_det

gwbischof

from scipy.io import wavfile
import matplotlib.pyplot as plt
import numpy as np
import pyfirmata
import pyaudio
import wave
import time

vocals = '/Users/gbischof/Downloads/Bush-Machinehead-Isolated-Vocals.wav'
full = '/Users/gbischof/Downloads/Bush-Machinehead.wav'

gwbischof

def plot_ophyd_device(device, dont_plot={'ramp_rate'}):
    '''
    Plot all of the signals of an ophyd device.
    There is probably some inaccuracy of the timestamps.
    Simple implementation.
    '''
    history = {signal: [getattr(device, signal).get()]
                     for signal in set(device.component_names) - dont_plot}
    history['timestamp'] = [time.time()]
    print(set(device.component_names) - dont_plot)

gwbischof

import time
import threading

from simple_pid import PID


class ThermalMaterial:
    """
    A material that you can heat and cool.

gwbischof

import time
import threading

class ThermalMaterial:
    """
    A material that you can heat and cool.

    Parameters
    ----------
    thermal_mass: float, optional

gwbischof

. /Users/gbischof/miniconda3/etc/profile.d/conda.sh

if [ ! -z "$BS_PYTHONPATH" ]; then
    if [ ! -z "$PYTHONPATH" ]; then
        export PYTHONPATH=$PYTHONPATH:$BS_PYTHONPATH
    else
        export PYTHONPATH=$BS_PYTHONPATH
    fi
fi

gwbischof

Install latest nsls2 conda environment locally

For Mac

Copy the env.yml file locally.

https://github.com/nsls2-conda-envs/nsls2-collection/blob/main/envs/env-py310.yml

Remove any linux specific packages. There could be some additional touchups required to get it to build.

Build the environment

gwbischof

import nslsii
from bluesky_kafka import Publisher
import uuid
from tiled.client import from_profile

c = from_profile("ucal")
config = nslsii._read_bluesky_kafka_config_file(config_file_path="/etc/bluesky/kafka.yml")
pub = Publisher(topic="ucal.bluesky.runengine.documents",
                bootstrap_servers=",".join(config['bootstrap_servers']),
                key=str(uuid.uuid4()),