Created
May 1, 2023 13:05
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Segmentation fault with memmaps examples
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import mmap | |
import os | |
from pathlib import Path | |
import numpy as np | |
def count_int16_elements(file_path): | |
file_size = os.path.getsize(file_path) | |
int16_size = np.dtype(np.int16).itemsize | |
return file_size // int16_size | |
folder_path = Path("/home/heberto/spikeinterface_datasets/ephy_testing_data/spikeglx/Noise4Sam_g0/Noise4Sam_g0_imec0") | |
file_path = folder_path / "Noise4Sam_g0_t0.imec0.ap.bin" | |
number_of_elements = count_int16_elements(file_path) | |
num_channels = 385 | |
shape = (number_of_elements // num_channels, num_channels) | |
file = open(file_path, 'rb') | |
memmap_obj = mmap.mmap(file.fileno(), length=0, access=mmap.ACCESS_READ) | |
array = np.ndarray.__new__(np.ndarray, shape=shape, dtype="int16", buffer=memmap_obj, order="C") | |
print("---------------------") | |
print(array) | |
memmap_obj.close() | |
print(array) | |
# This will throw a segmentation fault | |
print("---------------------") | |
file.close() | |
print(array) |
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