helske

library("ggplot2")
library("cowplot")
library("sp")
library("raster")
library("scales")
library("rgeos")

# course information, scraped from fgr.fi
fgr <- read.csv("fgr.csv")

helske

#!/bin/bash

# This is basically a dummy version of http://dirk.eddelbuettel.com/blog/2015/01/18/
# I could not get the above working when the package which I was testing (seqHMM) was not on CRAN (so install-deps did not work)

# start docker and run /bin/bash # with winpty thing use proper path instead of $(pwd)
docker -run -ti -v $(pwd):/mnt rocker/r-devel-ubsan-clang /bin/bash

# Use littler's install.r script for installing dependencies
install.r Rcpp RcppArmadillo nloptr numDeriv igraph TraMineR

helske

# start docker and run /bin/bash # with winpty thing use proper path instead of $(pwd)
docker -run -ti -v $(pwd):/mnt rocker/r-devel /bin/bash

# tsPI
# Use littler's install.r script for installing dependencies
install.r KFAS testthat
# check tsPI
Rdevel CMD check --as-cran tsPI_1.0.0.tar.gz 

# Rlibeemd

helske

# install solaris virtualbox: https://gist.github.com/jeroenooms/4c61c821172ad640545d

# create shared folder in virtualbox which contains your package

# install GSL: http://www.opencsw.org/packages/gsl_dev/

pkgadd -d http://get.opencsw.org/now
/opt/csw/bin/pkgutil -U
/opt/csw/bin/pkgutil -y -i gsl_dev 

helske

I don't have software installation rights at all with my basic account at work, but I have localadmin rights on a separate account. 
But as Atom installs itself automatically to user profile, 
I can't just install Atom for my normal account using the localadmin account. 
But this works: https://discuss.atom.io/t/how-to-install-atom-on-windows-to-other-places-instead-of-c/27619/12

In summary:
1. Install Atom with localadmin account
2. Run %LocalAppData%\Atom\app-VERSION\atom.exe --squirrel-uninstall VERSION (fill in version with the Semver version of Atom)
3. Move the %LocalAppData%\Atom folder to anywhere you want - make sure to move this root directory, not the app-VERSION directory
4. Run C:\Wherever\you\put\it\Atom\app-VERSION\atom.exe --squirrel-install VERSION

helske

library(rstan)

stan_code <- "
 data {
  int<lower=0> N;
  vector[N] y;
  vector[N] a;
  vector[N] x1;
  vector[N] x2;
}