Files for Ticket #1105 on Trac

test.fasta

> ade fas df asdf asd f
POIQUWEOIRUQOIEWURPOQIWUERPOQIWUERPOIQUEWRPOIUEWQR

third_app.cpp

#include <seqan/basic.h>
#include <seqan/sequence.h>
#include <seqan/seq_io.h>

#include <seqan/arg_parse.h>

using namespace std ;
using namespace seqan ;


int main(int argc, char const ** argv)
{
  
    if (argc < 2) {
      cerr << "USAGE: basic_seq_io_example FILENAME\n";
      return 1;
    }

    cerr << argv[0] << ": Reading! from " << argv[1] << endl ;

    CharString id;
    Dna5String seq;

    SequenceStream seqStream(argv[1]);
    if( ! isGood( seqStream ) ) {
      cerr << "Cannot read file " << argv[0] << endl ;
      return 1  ;
    }

    if( readRecord(id, seq, seqStream) != 0 ) {
      cerr << "There was an error reading the sequence" << endl ;
    } else {
      cout << id << '\t' << seq << '\n';
    }

    return 0;
}