Created
October 18, 2018 06:50
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Convert between .mat and .h5
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#!/usr/bin/python3 | |
import h5py | |
import numpy | |
import scipy.io | |
import argparse | |
parser = argparse.ArgumentParser() | |
parser.add_argument("file", help="h5 file or mat file") | |
args = parser.parse_args() | |
data = {} | |
if args.file.endswith('.h5'): | |
with h5py.File(args.file) as fd: | |
for i in fd.keys(): | |
data[i] = fd[i][...] | |
scipy.io.savemat(args.file[:-3] + '.mat', data) | |
elif args.file.endswith('.mat'): | |
data = scipy.io.loadmat(args.file) | |
with h5py.File(args.file[:-4] + '.h5', 'w') as fd: | |
for i in data.keys(): | |
if i not in ['__globals__', '__header__', '__version__']: | |
fd[i] = numpy.squeeze(data[i]) | |
else: | |
raise ValueError('filename must ends with .h5 or .mat') | |
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Hello, i am not able to share the .mat files here.