ilkayisik

from PIL import Image

im = Image.open('Foto.jpg')
im.save('Foto.png')

ilkayisik

# Exporting the environment.yml file

# Activate the environment to export: 
conda activate myenv

# go to the directory where you want the newly created .yml file to be
cd /Users/ilkayisik/Desktop/

# Export your active environment to a new file
conda env export > environment.yml

ilkayisik

'''make square matrix from vector'''

import numpy as np
nr_elems = 253
vals = np.random.rand(nr_elems)

# first method using scipy distance: 
from scipy.spatial import distance
vals_square_1 = distance.squareform(vals)

ilkayisik

# local to external hd
rsync -azP --delete /Users/ilkay.isik/project_folder_temp/fc_content/MRI_data/lscp_data /Volumes/ilkay_iMAC

# external hd to local
rsync -azP --delete /Volumes/ilkay_iMAC /Users/ilkay.isik/project_folder_temp/fc_content/MRI_data/lscp_data 

ilkayisik

cd /path
convert -delay 50 -loop 0 cope6*.png cope6_gif.gif

ilkayisik

# favorite jupyter notebook themes
#https://github.com/dunovank/jupyter-themes

# light
jt -r # restore default theme
jt -t grade3 -f roboto -fs 12 -ofs 11 -cellw 90% -lineh 130 -T -N
jupyter notebook


# dark can also be onedork

ilkayisik

1 - cdf('t', tval, df)

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labels = ['pericalc','FFA','MT','comb_a','comb_b']
comb_ind = [labels.index(l) for l in labels if l.startswith('comb')]
len_comb = len(comb_ind)
arr = np.arange(len(labels))
arr = list(arr[~np.isin(arr, comb_ind)])
labels = [i for j, i in enumerate(labels) if j in arr]

ilkayisik

mask = np.zeros([18, 18, 1, 4])
for i in range(mask.shape[3]):
    mask[:, :, 0, :] = ipl_mask
no_mask = np.zeros_like(mask)


k = 0
mask_all_sub = np.zeros_like(four_dim_array)
for s, sub in enumerate(sub_list):
    if sub in missing_roi_sub:

ilkayisik

#!/bin/bash
# How to skip the first line while using read, 
# how to check a value and increment based on the value of another variable,
# pipe a value from bash to awk to parse the line and get the value as a variable to use in another bash command

PREVCINDEX=99999
i=1  # skip the first line (part 1)
while read LINE
do
    test $i -eq 1 && ((i=i+1)) && continue # skip the first line (part 2)