fmix_utils.py

import numpy as np
import random, math
from scipy.stats import beta

def binarise_mask(mask, lam, in_shape, max_soft=0.0):
    """ Binarises a given low frequency image such that it has mean lambda.
    :param mask: Low frequency image, usually the result of `make_low_freq_image`
    :param lam: Mean value of final mask
    :param in_shape: Shape of inputs
    :param max_soft: Softening value between 0 and 0.5 which smooths hard edges in the mask.
    :return:
    """
    idx = mask.reshape(-1).argsort()[::-1]
    mask = mask.reshape(-1)
    num = math.ceil(lam * mask.size) if random.random() > 0.5 else math.floor(lam * mask.size)

    eff_soft = max_soft
    if max_soft > lam or max_soft > (1-lam):
        eff_soft = min(lam, 1-lam)

    soft = int(mask.size * eff_soft)
    num_low = num - soft
    num_high = num + soft

    mask[idx[:num_high]] = 1
    mask[idx[num_low:]] = 0
    mask[idx[num_low:num_high]] = np.linspace(1, 0, (num_high - num_low))

    mask = mask.reshape((1, *in_shape))
    return mask

def make_low_freq_image(decay, shape, ch=1):
    """ Sample a low frequency image from fourier space
    :param decay_power: Decay power for frequency decay prop 1/f**d
    :param shape: Shape of desired mask, list up to 3 dims
    :param ch: Number of channels for desired mask
    """
    freqs = fftfreqnd(*shape)
    spectrum = get_spectrum(freqs, decay, ch, *shape)#.reshape((1, *shape[:-1], -1))
    spectrum = spectrum[:, 0] + 1j * spectrum[:, 1]
    mask = np.real(np.fft.irfftn(spectrum, shape))

    if len(shape) == 1:
        mask = mask[:1, :shape[0]]
    if len(shape) == 2:
        mask = mask[:1, :shape[0], :shape[1]]
    if len(shape) == 3:
        mask = mask[:1, :shape[0], :shape[1], :shape[2]]

    mask = mask
    mask = (mask - mask.min())
    mask = mask / mask.max()
    return mask


def sample_lam(alpha, reformulate=False):
    """ Sample a lambda from symmetric beta distribution with given alpha
    :param alpha: Alpha value for beta distribution
    :param reformulate: If True, uses the reformulation of [1].
    """
    if reformulate:
        lam = beta.rvs(alpha+1, alpha)
    else:
        lam = beta.rvs(alpha, alpha)

    return lam

def sample_mask(alpha, decay_power, shape, max_soft=0.0, reformulate=False):
    """ Samples a mean lambda from beta distribution parametrised by alpha, creates a low frequency image and binarises
    it based on this lambda
    :param alpha: Alpha value for beta distribution from which to sample mean of mask
    :param decay_power: Decay power for frequency decay prop 1/f**d
    :param shape: Shape of desired mask, list up to 3 dims
    :param max_soft: Softening value between 0 and 0.5 which smooths hard edges in the mask.
    :param reformulate: If True, uses the reformulation of [1].
    """
    if isinstance(shape, int):
        shape = (shape,)

    # Choose lambda
    lam = sample_lam(alpha, reformulate)

    # Make mask, get mean / std
    mask = make_low_freq_image(decay_power, shape)
    mask = binarise_mask(mask, lam, shape, max_soft)

    return lam, mask


def fftfreqnd(h, w=None, z=None):
    """ Get bin values for discrete fourier transform of size (h, w, z)
    :param h: Required, first dimension size
    :param w: Optional, second dimension size
    :param z: Optional, third dimension size
    """
    fz = fx = 0
    fy = np.fft.fftfreq(h)

    if w is not None:
        fy = np.expand_dims(fy, -1)

        if w % 2 == 1:
            fx = np.fft.fftfreq(w)[: w // 2 + 2]
        else:
            fx = np.fft.fftfreq(w)[: w // 2 + 1]

    if z is not None:
        fy = np.expand_dims(fy, -1)
        if z % 2 == 1:
            fz = np.fft.fftfreq(z)[:, None]
        else:
            fz = np.fft.fftfreq(z)[:, None]

    return np.sqrt(fx * fx + fy * fy + fz * fz)

def get_spectrum(freqs, decay_power, ch, h, w=0, z=0):
    """ Samples a fourier image with given size and frequencies decayed by decay power
    :param freqs: Bin values for the discrete fourier transform
    :param decay_power: Decay power for frequency decay prop 1/f**d
    :param ch: Number of channels for the resulting mask
    :param h: Required, first dimension size
    :param w: Optional, second dimension size
    :param z: Optional, third dimension size
    """
    scale = np.ones(1) / (np.maximum(freqs, np.array([1. / max(w, h, z)])) ** decay_power)

    param_size = [ch] + list(freqs.shape) + [2]
    param = np.random.randn(*param_size)

    scale = np.expand_dims(scale, -1)[None, :]

    return scale * param