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Install R with OpenBLAS via Homebrew
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# Stat Installation | |
# XCode CLT | |
xcode-select --install | |
# Update Homebrew | |
brew update | |
# Check for broken dependencies and/or outdated packages | |
brew doctor | |
brew prune | |
# R | |
brew install openblas --with-openmp | |
brew install r --with-openblas | |
echo ".libPaths('~/Library/R/3.4/library')" >> ~.RProfile | |
# data.table with enabled OpenMP | |
brew install llvm | |
echo 'export PATH="/usr/local/opt/llvm/bin:$PATH"' >> ~/.bashrc | |
mkdir ~/.R | |
echo "CC=/usr/local/opt/llvm/bin/clang -fopenmp | |
CXX=/usr/local/opt/llvm/bin/clang++ | |
# -O3 should be faster than -O2 (default) level optimisation . | |
CFLAGS=-g -O3 -Wall -pedantic -std=gnu99 -mtune=native -pipe | |
CXXFLAGS=-g -O3 -Wall -pedantic -std=c++11 -mtune=native -pipe | |
LDFLAGS=-L/usr/local/opt/gettext/lib -L/usr/local/opt/llvm/lib -Wl,-rpath,/usr/local/opt/llvm/lib | |
CPPFLAGS=-I/usr/local/opt/gettext/include -I/usr/local/opt/llvm/include" >> ~/.R/Makevars | |
# data.table | |
R --vanilla << EOF | |
install.packages('data.table', repos='https://cloud.r-project.org/') | |
q() | |
EOF | |
rm ~/.R/Makevars | |
echo "CC=/usr/local/opt/llvm/bin/clang | |
CXX=/usr/local/opt/llvm/bin/clang++" >> ~/.R/Makevars | |
# devtools | |
R --vanilla << EOF | |
install.packages('devtools', dependencies=TRUE, | |
repos='https://cloud.r-project.org/') | |
q() | |
EOF | |
# testthat | |
R --vanilla << EOF | |
install.packages('testthat', dependencies=TRUE, | |
repos='https://cloud.r-project.org/') | |
q() | |
EOF | |
# roxygen2 | |
R --vanilla << EOF | |
install.packages('roxygen2', dependencies=TRUE, | |
repos='https://cloud.r-project.org/') | |
q() | |
EOF | |
# rlang | |
R --vanilla << EOF | |
install.packages('rlang', dependencies=TRUE, | |
repos='https://cloud.r-project.org/') | |
q() | |
EOF | |
# knitr | |
R --vanilla << EOF | |
install.packages('knitr', dependencies=TRUE, repos='https://cloud.r-project.org/') | |
q() | |
EOF | |
# rmarkdown | |
R --vanilla << EOF | |
install.packages('rmarkdown', dependencies=TRUE, | |
repos='https://cloud.r-project.org/') | |
q() | |
EOF | |
# bookdown | |
R --vanilla << EOF | |
install.packages('bookdown', dependencies=TRUE, | |
repos='https://cloud.r-project.org/') | |
q() | |
EOF | |
# tidyverse | |
R --vanilla << EOF | |
install.packages('tidyverse', dependencies=TRUE, | |
repos='https://cloud.r-project.org/') | |
q() | |
EOF | |
# ggrepel | |
R --vanilla << EOF | |
install.packages('ggrepel', dependencies=TRUE, | |
repos='https://cloud.r-project.org/') | |
q() | |
EOF | |
# gganimate | |
R --vanilla << EOF | |
install.packages('gganimate', dependencies=TRUE, | |
repos='https://cloud.r-project.org/') | |
q() | |
EOF | |
# ggthemes | |
R --vanilla << EOF | |
install.packages('ggthemes', dependencies=TRUE, | |
repos='https://cloud.r-project.org/') | |
q() | |
EOF | |
# ggmap | |
R --vanilla << EOF | |
install.packages('ggmap', dependencies=TRUE, | |
repos='https://cloud.r-project.org/') | |
q() | |
EOF | |
# RColoBrewer | |
R --vanilla << EOF | |
install.packages('RColorBrewer', dependencies=TRUE, | |
repos='https://cloud.r-project.org/') | |
q() | |
EOF | |
# dendextend | |
R --vanilla << EOF | |
install.packages('dendextend', dependencies=TRUE, | |
repos='https://cloud.r-project.org/') | |
q() | |
EOF | |
# kml3d | |
R --vanilla << EOF | |
install.packages('kml3d', dependencies=TRUE, | |
repos='https://cloud.r-project.org/') | |
q() | |
EOF | |
# GDAtools | |
R --vanilla << EOF | |
install.packages('GDAtools', dependencies=TRUE, | |
repos='https://cloud.r-project.org/') | |
q() | |
EOF | |
# FactoMineR | |
R --vanilla << EOF | |
install.packages('FactoMineR', dependencies=TRUE, | |
repos='https://cloud.r-project.org/') | |
q() | |
EOF | |
# FactoInvestigate | |
R --vanilla << EOF | |
install.packages('FactoInvestigate', dependencies=TRUE, | |
repos='https://cloud.r-project.org/') | |
q() | |
EOF | |
# missMDA | |
R --vanilla << EOF | |
install.packages('missMDA', dependencies=TRUE, | |
repos='https://cloud.r-project.org/') | |
q() | |
EOF | |
# factoextra | |
R --vanilla << EOF | |
install.packages('factoextra', dependencies=TRUE, | |
repos='https://cloud.r-project.org/') | |
q() | |
EOF | |
# showtext | |
R --vanilla << EOF | |
install.packages('showtext', dependencies=TRUE, | |
repos='https://cloud.r-project.org/') | |
q() | |
EOF | |
# sysfonts | |
R --vanilla << EOF | |
install.packages('sysfonts', dependencies=TRUE, | |
repos='https://cloud.r-project.org/') | |
q() | |
EOF | |
# Hmisc | |
R --vanilla << EOF | |
install.packages('Hmisc', dependencies=TRUE, | |
repos='https://cloud.r-project.org/') | |
q() | |
EOF | |
# explor | |
R --vanilla << EOF | |
install.packages('explor', dependencies=TRUE, | |
repos='https://cloud.r-project.org/') | |
q() | |
EOF | |
# questionr | |
R --vanilla << EOF | |
install.packages('questionr', dependencies=TRUE, | |
repos='https://cloud.r-project.org/') | |
q() | |
EOF | |
# archivist | |
R --vanilla << EOF | |
install.packages('archivist', dependencies=TRUE, | |
repos='https://cloud.r-project.org/') | |
q() | |
EOF | |
# archivist.github | |
R --vanilla << EOF | |
install.packages('archivist.github', dependencies=TRUE, | |
repos='https://cloud.r-project.org/') | |
q() | |
EOF | |
# shiny | |
R --vanilla << EOF | |
install.packages('shiny', dependencies=TRUE, | |
repos='https://cloud.r-project.org/') | |
q() | |
EOF | |
# learnr | |
R --vanilla << EOF | |
install.packages('learnr', dependencies=TRUE, | |
repos='https://cloud.r-project.org/') | |
q() | |
EOF | |
# pacman | |
R --vanilla << EOF | |
install.packages('pacman', dependencies=TRUE, | |
repos='https://cloud.r-project.org/') | |
q() | |
EOF | |
# TimeSpaceAnalysis | |
R --vanilla << EOF | |
pacman::p_install_gh("inventionate/TimeSpaceAnalysis", dependencies=TRUE) | |
q() | |
EOF |
Thank you for the script. Unfortunately, homebrew
does not accept install option flags anymore and thus the instructions are more or less useless now. I found a guide here that does work.
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Es besteht ein Problem mit x11(). Die Nutzung von KML ist daher nur eingeschränkt möglich.