Last active
November 28, 2019 15:30
-
-
Save iwasaki-kenta/22f12d3d8d41048799e3ff678768563e to your computer and use it in GitHub Desktop.
Cuckoo Filter. Assume content is pre-hashed with a 256-bit hash function.
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
import {Bucket, CuckooFilter} from "../src/cuckoo"; | |
import {hash} from "../src/crypto"; | |
import {assert} from "chai"; | |
import {SmartBuffer} from "smart-buffer"; | |
describe('CuckooFilter', () => { | |
it('sets and gets properly', () => { | |
const filter = new CuckooFilter(4, 100, 500); | |
for (let i = 0; i < 100; i++) { | |
const id = hash(Buffer.of(i)); | |
assert.isTrue(filter.set(id)); | |
assert.isTrue(filter.contains(id)); | |
} | |
let evicted: number = 0; | |
for (let i = 0; i < 100; i++) { | |
const id = hash(Buffer.of(i)); | |
if (!filter.contains(id)) { | |
evicted++; | |
} | |
} | |
assert.isBelow(evicted, 50); | |
const reconstructed = CuckooFilter.unmarshal(SmartBuffer.fromBuffer(filter.marshal())); | |
it('marshals and unmarshals properly', () => assert.deepStrictEqual(filter, reconstructed)); | |
let count: number = 0; | |
for (let i = 0; i < 100; i++) { | |
const id = hash(Buffer.of(i)); | |
if (!reconstructed.contains(id)) { | |
count++; | |
} | |
} | |
assert.equal(evicted, count); | |
}) | |
}); |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
import {toBigIntBE} from 'bigint-buffer'; | |
import {Deserializable, hash, Serializable, statics} from '@perlin/noise'; | |
import {SmartBuffer} from 'smart-buffer'; | |
const EMPTY_FINGERPRINT = Buffer.alloc(32); | |
@statics<Deserializable>() | |
export class Bucket implements Serializable { | |
public constructor( | |
private readonly capacity: number, | |
private readonly entries: Buffer[] = [...new Array(capacity)].map( | |
() => undefined | |
) | |
) {} | |
get full() { | |
return this.entries.filter(stored => stored).length === this.capacity; | |
} | |
get empty() { | |
return this.entries.length === 0; | |
} | |
public static unmarshal(buf: SmartBuffer, capacityPerBucket = 100): Bucket { | |
return new Bucket( | |
capacityPerBucket, | |
[...new Array(capacityPerBucket)].map(() => | |
buf.readUInt8() === 1 ? buf.readBuffer(32) : undefined | |
) | |
); | |
} | |
set(id: Buffer): boolean { | |
if (this.full) return false; | |
const index = this.entries.findIndex(stored => !stored); | |
this.entries[index] = id; | |
return true; | |
} | |
contains(id: Buffer): boolean { | |
return this.entries.some( | |
stored => stored && Buffer.compare(stored, id) === 0 | |
); | |
} | |
delete(id: Buffer): boolean { | |
if (this.empty) return false; | |
const index = this.entries.findIndex( | |
stored => Buffer.compare(stored, id) === 0 | |
); | |
if (index === -1) return false; | |
this.entries[index] = undefined; | |
} | |
swap(id: Buffer): Buffer { | |
const index = Math.floor(Math.random() * this.entries.length); | |
[id, this.entries[index]] = [this.entries[index], id]; | |
return id; | |
} | |
marshal(): Buffer { | |
const w = new SmartBuffer(); | |
this.entries.forEach(stored => | |
w.writeBuffer( | |
stored ? Buffer.concat([Buffer.of(1), stored]) : Buffer.of(0) | |
) | |
); | |
return w.toBuffer(); | |
} | |
} | |
@statics<Deserializable>() | |
export class CuckooFilter implements Serializable { | |
private readonly buckets: Bucket[]; | |
private size = 0; | |
public constructor( | |
public readonly numBuckets: number = 100, | |
public readonly capacityPerBucket: number = 8, | |
public readonly maxEvictionKicks: number = 500, | |
buckets: Bucket[] = [...new Array(numBuckets)].map( | |
() => new Bucket(capacityPerBucket) | |
) | |
) { | |
this.buckets = buckets; | |
} | |
public static unmarshal( | |
buf: SmartBuffer, | |
maxEvictionKicks = 500 | |
): CuckooFilter { | |
const numBuckets = buf.readUInt16BE(); | |
const capacityPerBucket = buf.readUInt8(); | |
const size = buf.readUInt32BE(); | |
const filter = new CuckooFilter( | |
numBuckets, | |
capacityPerBucket, | |
maxEvictionKicks, | |
[...new Array(numBuckets)].map(() => | |
Bucket.unmarshal( | |
SmartBuffer.fromBuffer(buf.readBuffer(buf.readUInt32BE())), | |
capacityPerBucket | |
) | |
) | |
); | |
filter.size = size; | |
return filter; | |
} | |
public set(id: Buffer): boolean { | |
if (this.contains(id)) return false; | |
const [first, second, firstIndex, secondIndex] = this.twoBuckets(id); | |
if (first.set(id) || second.set(id)) { | |
this.size++; | |
return true; | |
} | |
for ( | |
let i = 0, | |
index = Math.floor(Math.random() * 2) === 1 ? firstIndex : secondIndex; | |
i < this.maxEvictionKicks; | |
i++ | |
) { | |
const bucket = this.buckets[index]; | |
const swapped = bucket.swap(id) || EMPTY_FINGERPRINT; | |
index = | |
(index ^ | |
Number(BigInt(toBigIntBE(hash(swapped))) % BigInt(this.numBuckets))) % | |
this.numBuckets; | |
if (bucket.set(swapped)) { | |
this.size++; | |
return true; | |
} | |
} | |
return false; | |
} | |
public contains(id: Buffer): boolean { | |
if (this.size === 0) return false; | |
const [first, second] = this.twoBuckets(id); | |
return first.contains(id) || second.contains(id); | |
} | |
public delete(id: Buffer): boolean { | |
if (this.size === 0) return false; | |
const [first, second] = this.twoBuckets(id); | |
if (first.delete(id) || second.delete(id)) { | |
this.size--; | |
return true; | |
} | |
return false; | |
} | |
public marshal(): Buffer { | |
const w = new SmartBuffer(); | |
w.writeUInt16BE(this.numBuckets); | |
w.writeUInt8(this.capacityPerBucket); | |
w.writeUInt32BE(this.size); | |
this.buckets.forEach(bucket => { | |
const data = bucket.marshal(); | |
w.writeUInt32BE(data.byteLength); | |
w.writeBuffer(data); | |
}); | |
return w.toBuffer(); | |
} | |
private twoBuckets(id: Buffer): [Bucket, Bucket, number, number] { | |
const [firstIndex, secondIndex] = this.twoIndices(id); | |
return [ | |
this.buckets[firstIndex], | |
this.buckets[secondIndex], | |
firstIndex, | |
secondIndex | |
]; | |
} | |
private twoIndices(id: Buffer): [number, number] { | |
const first = Number(BigInt(toBigIntBE(id)) % BigInt(this.numBuckets)); | |
const second = | |
(first ^ Number(BigInt(toBigIntBE(hash(id))) % BigInt(this.numBuckets))) % | |
this.numBuckets; | |
return [first, second]; | |
} | |
} |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment