-
-
Save jctoledo/5880104 to your computer and use it in GitHub Desktop.
Q9: retrieve orthologous human and mouse genes annotated with function to bind ATP
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
SPARQL-DL : Type(?human_gene, 'gene'), Type(?mouse_gene, 'gene'), Type(?homologene_group, HomoloGene_Group), PropertyValue(?human_gene, has_taxid, 'Homo sapiens'), PropertyValue(?mouse_gene, has_taxid, 'Mus musculus'), PropertyValue(?human_gene,'has function', 'ATP binding'), PropertyValue(?mouse_gene, 'has function', 'ATP binding'), PropertyValue(?homologene_group, has_gene, ?human_gene), PropertyValue(?homologene_group, has_gene, ?mouse_gene) | |
# gene : http://semanticscience.org/resource/SIO_010035 | |
# HomoloGene_Group : http://bio2rdf.org/homologene_vocabulary:HomoloGene_Group | |
# has_taxid : http://bio2rdf.org/geneid_vocabulary:has_taxid | |
# 'Homo sapiens' : http://bio2rdf.org/taxon:9606 | |
# 'Mus musculus' : http://bio2rdf.org/taxon:10090 | |
# 'has function' : http://semanticscience.org/resource/SIO_000225 | |
# 'ATP binding' : http://bio2rdf.org/go:0005524 | |
# has_gene : http://bio2rdf.org/homologene_vocabulary:has_gene |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment