Minimal debian image with Python 3.6 and geo python tools

Dockerfile

FROM python:3.6-slim-stretch

ADD requirements.txt /tmp/requirements.txt

RUN apt-get update && \
    apt-get install -y \
        build-essential \
        make \
        gcc \
        locales \
        libgdal20 libgdal-dev && \
    python -m pip install numpy cython --no-binary numpy,cython && \
    python -m pip install \
        "rasterio>=1.0a12" fiona shapely \
        --pre --no-binary rasterio,fiona,shapely && \
    python -m pip install -r /tmp/requirements.txt && \
    python -m pip uninstall -y cython && \
    rm -r /root/.cache/pip && \
    apt-get remove -y --purge libgdal-dev make gcc build-essential && \
    apt-get autoremove -y && \
    rm -rf /var/lib/apt/lists/*

RUN dpkg-reconfigure locales && \
    locale-gen C.UTF-8 && \
    /usr/sbin/update-locale LANG=C.UTF-8

ENV LC_ALL C.UTF-8

CMD ["/bin/python"]

Makefile

default: image test notebook

.PHONY: image shell

image:
	docker build --tag slimpy:latest .

test:
	docker run -it --rm slimpy:latest python -c "import rasterio, fiona, shapely, numpy, sys; print('Python:', sys.version); print('Rasterio:', rasterio.__version__); print('Fiona:', fiona.__version__); print('Shapely:', shapely.__version__); print('Numpy', numpy.__version__);"

shell: image
	docker run -it --rm slimpy:latest /bin/bash

notebook:
	docker run -it --rm \
		-p 0.0.0.0:8888:8888 \
		--rm \
		--interactive \
		--tty \
		--volume $(shell pwd)/notebooks/:/notebooks \
		slimpy:latest  /bin/bash -c "cd /notebooks && jupyter notebook --ip=0.0.0.0 --allow-root"

requirements.txt

rasterio>=1.0a12
fiona
shapely
pandas
geopandas
pyproj
mapbox
rasterstats
mapboxgl
jupyter
mercantile
scipy
scikit-learn
seaborn
statsmodels
ggplot