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venn diagram with three circles showing overlap order
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| from matplotlib_venn import venn2, venn3 | |
| import matplotlib.pyplot as plt | |
| # venn2 subsets are a b ab (where a is n_unique_to_a, ab is intersection of a,b) | |
| # called by venn2(subsets = (a_name,b_name,intersection_name), set_labels = (pair[0], pair[1],'both'), alpha = 0.5) | |
| # venn3 subsets are a b ab c ca cb abc | |
| # called by venn3(subsets = (a,b,ab,c,ca,cb,n), | |
| # set_labels = (a_name,b_name,c_name), alpha = 0.5) | |
| df = pd.read_excel('Analsys with Super Codes.xlsx', engine='openpyxl') | |
| d1 = defaultdict(int) | |
| d2 = defaultdict(int) | |
| d3 = defaultdict(int) | |
| d4 = defaultdict(int) | |
| d5 = defaultdict(int) | |
| for i,row in df.iterrows(): | |
| row | |
| print(i,row) | |
| allitems = [] | |
| for code,val in row.iteritems(): | |
| if val: | |
| d1[code] += 1 | |
| allitems.append(code) | |
| if len(allitems)>1: | |
| c2 = combinations(allitems,2) | |
| for comb in c2: | |
| d2[comb] += 1 | |
| if len(allitems)>2: | |
| c3 = combinations(allitems,3) | |
| for comb in c3: | |
| d3[comb] += 1 | |
| if len(allitems)>3: | |
| c4 = combinations(allitems,4) | |
| for comb in c4: | |
| d4[comb] += 1 | |
| if len(allitems)>4: | |
| c5 = combinations(allitems,5) | |
| for comb in c5: | |
| d5[comb] += 1 | |
| for pair,n in d2.items(): | |
| n_single1 = d1[pair[0]]-n | |
| n_single2 = d1[pair[1]]-n | |
| # fig=plt.figure() | |
| plt.clf() | |
| venn2(subsets = (n_single1,n_single2,n), set_labels = (pair[0], pair[1],'both'), alpha = 0.5) | |
| plt.savefig(f'{pair[0]}_{pair[1]}.png') | |
| for triplet,n in d3.items(): | |
| tot_single1 = d1[triplet[0]] | |
| tot_single2 = d1[triplet[1]] | |
| tot_single3 = d1[triplet[2]] | |
| double12 = d2_all[(triplet[0],triplet[1])] | |
| double23 = d2_all[(triplet[1], triplet[2])] | |
| double31 = d2_all[(triplet[0], triplet[2])] | |
| plt.clf() | |
| a= tot_single1-double12-double31+n | |
| b=tot_single2-double12-double23+n | |
| ab=double12-n | |
| c=tot_single3 - double31-double23+n | |
| ca = double31-n | |
| cb = double23-n | |
| venn3(subsets = (a,b,ab,c,ca,cb,n), | |
| set_labels = (triplet[0],triplet[1],triplet[2]), alpha = 0.5) | |
| plt.savefig(f'{triplet[0]}_{triplet[1]}_{triplet[2]}.png') |
Author
jeremy-rutman
commented
Feb 14, 2021

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