Last active
February 11, 2016 19:11
-
-
Save jhamman/173814ea7ce7c7852449 to your computer and use it in GitHub Desktop.
grids for Diana
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| from acf.raster import grid_info | |
| #----------------------------------------------# | |
| fnames = os.listdir(force_dir) | |
| lons = np.empty(len(fnames)) | |
| lats = np.empty(len(fnames)) | |
| for i, fname in enumerate(fnames): | |
| pre, lat, lon = fname.split('_') | |
| lons[i] = float(lon) | |
| lats[i] = float(lat) | |
| target, (y, x) = grid_info(lons, lats) | |
| target.mask.plot() | |
| #----------------------------------------------# | |
| variables = ['prcp', 'tmax', 'tmin'] | |
| mask_shape = target['mask'].shape | |
| var_shape = (len(time), ) + mask_shape | |
| coords = dict(time=time, **target['mask'].coords) | |
| for var in variables: | |
| target[var] = xray.DataArray(np.full(var_shape, np.nan), coords=coords, | |
| attrs=attrs[var], | |
| dims=('time', 'latitude', 'longitude')) | |
| for i, fname in enumerate(fnames): | |
| df = pd.read_table(os.path.join(force_dir, fname), | |
| engine='python', sep=' ', | |
| names=['prcp', 'tmax', 'tmin', 'wind']) | |
| for var in variables: | |
| target[var].values[:, y[i], x[i]] = df[var].values | |
| #----------------------------------------------# | |
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| import numpy as np | |
| import xray | |
| from scipy.spatial import cKDTree | |
| def latlon2yx(plats, plons, glats, glons): | |
| '''find y x coordinates''' | |
| if glons.ndim == 1 or glats.ndim == 1: | |
| glons, glats = np.meshgrid(glons, glats) | |
| combined = np.dstack(([glats.ravel(), glons.ravel()]))[0] | |
| points = list(np.vstack((np.array(plats), np.array(plons))).transpose()) | |
| mytree = cKDTree(combined) | |
| dist, indexes = mytree.query(points, k=1) | |
| y, x = np.unravel_index(np.array(indexes), glons.shape) | |
| return y, x | |
| def grid_info(lons, lats, decimals=4): | |
| '''return a xray.Dataset describing the grid shape/mask of a domain from 1D | |
| numpy Arrays of lons/lats''' | |
| grid = xray.Dataset() | |
| # get unique lats and lons | |
| lon = np.sort(np.unique(lons.round(decimals=decimals))) | |
| lat = np.sort(np.unique(lats.round(decimals=decimals))) | |
| # coords | |
| lon_da = xray.DataArray(lon, dims=('longitude', ), name='longitude', | |
| attrs={'long_name': 'longitude coordinate'}) | |
| lat_da = xray.DataArray(lat, dims=('latitude', ), name='latitude', | |
| attrs={'long_name': 'latitude coordinate'}) | |
| shape = (len(lat), len(lon)) | |
| y, x = latlon2yx(lats, lons, lat, lon) | |
| # mask | |
| mask = np.full(shape, np.nan) | |
| mask[y, x] = 1 | |
| grid['mask'] = xray.DataArray(mask, dims=('latitude', 'longitude'), | |
| name='mask', | |
| coords={'latitude': lat_da, | |
| 'longitude': lon_da}, | |
| attrs={'long_name': 'domain mask', | |
| 'comment': '0 indicates grid cell ' | |
| 'is not active'}) | |
| return grid, (y, x) |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment