slowkow

#!/usr/bin/env python
"""
The Needleman-Wunsch Algorithm
==============================

This is a dynamic programming algorithm for finding the optimal alignment of
two strings.

Example
-------

aufflick

#!/usr/bin/env perl

# You can use this script in a pipe. It's input will become an emacs buffer
# via emacsclient (so you need server-start etc.)

# See http://mark.aufflick.com/o/886457 for more information

# Copyright (C) 2011 by Mark Aufflick <[email protected]>
# 
# Permission is hereby granted, free of charge, to any person obtaining a copy