Monitor script for cedar

runMonitor.sh

#!/bin/bash
#SBATCH --account=def-jklymak
#SBATCH [email protected]
#SBATCH --mail-type=ALL
#SBATCH --ntasks-per-node=1
#SBATCH --time=0-00:15
#SBATCH --mem=64G

cd ${SLURM_SUBMIT_DIR}

top=${SLURM_JOB_NAME}

source /home/jklymak/venvs/butewind/bin/activate

runagain=false
# plot_snap.py finds the latest data file and plots that...
if python plot_snap.py ${top}; then
    runagain=true
fi

ssh boo.uvic.ca 'chmod a+rx Sites/ButeWinds/${SLURM_JOB_NAME}/Snaps;chmod a+rx Sites/ButeWinds/${SLURM_JOB_NAME}/Snaps/*.png'

if ${runagain}; then
    sbatch --job-name=${SLURM_JOB_NAME} --exclude=cdr2098  --begin=now+1hour runMonitor.sh
fi