Jeff Law jlaw9
jlaw9
/ 250220_ecoli_k12_o157.ipynb
Last active
May 22, 2025 20:38
Ecoli k12, o157 proteome comparison
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
jlaw9
/ Grid_sampling_simple_JL.ipynb
Created
March 4, 2025 22:09
Code to sample points from a distribution using an evenly spaced grid. The grid is rotated along the principal axis, and each point of the grid is matched to the closest datapoint, if there is one within a specific radius
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
jlaw9
/ 20240517_fit_curves.ipynb
Last active
May 20, 2024 18:39
Code for automatically parsing results from OpenTrons experiments
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
jlaw9
/ permute_sparse_matrix.py
Last active
November 13, 2020 20:42
— forked from vtraag/permute_sparse_matrix.py
Permute sparse matrix in Python using scipy COO format
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| from scipy import sparse | |
| def permute_sparse_matrix(M, row_order=None, col_order=None): | |
| """ | |
| Reorders the rows and/or columns in a scipy sparse matrix to the specified order. | |
| """ | |
| if row_order is None and col_order is None: | |
| return M | |
| new_M = M |