Created
November 15, 2014 23:49
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grab data from the american gut consortium
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| #!/bin/bash | |
| # grab the biom data | |
| wget https://github.com/biocore/American-Gut/raw/master/data/PGP/PGP_100nt.biom.gz | |
| wget https://github.com/biocore/American-Gut/raw/master/data/HMP/HMPv35_100nt.biom.gz | |
| wget https://github.com/biocore/American-Gut/raw/master/data/GG/GG_100nt.biom.gz | |
| wget https://github.com/biocore/American-Gut/raw/master/data/AG/AG_100nt.biom.gz | |
| gunzip * | |
| # grab the phenodata | |
| wget https://github.com/biocore/American-Gut/raw/master/data/PGP/PGP_100nt.txt | |
| wget https://github.com/biocore/American-Gut/raw/master/data/HMP/HMPv35_100nt.txt | |
| wget https://github.com/biocore/American-Gut/raw/master/data/GG/GG_100nt.txt | |
| wget https://raw.githubusercontent.com/biocore/American-Gut/master/data/AG/AG_100nt.txt |
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