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January 8, 2019 18:01
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| [0;32m Fetching dependancies[0m | |
| [0;32m Python dependancies[0m | |
| [0;32m NumPy...[0m | |
| Requirement already satisfied (use --upgrade to upgrade): numpy in ./panoptes_virtualenv/lib/python2.7/site-packages | |
| Cleaning up... | |
| [0;32m Panoptes requirements...[0m | |
| Downloading/unpacking https://github.com/cggh/DQXTableUtils/raw/master/dist/DQXTableUtils-0.1.1.tar.gz (from -r /home/jody/panoptes-master/server/REQUIREMENTS (line 1)) | |
| Downloading DQXTableUtils-0.1.1.tar.gz | |
| Running setup.py (path:/tmp/pip-8BJ9YK-build/setup.py) egg_info for package from https://github.com/cggh/DQXTableUtils/raw/master/dist/DQXTableUtils-0.1.1.tar.gz | |
| Downloading/unpacking git+git://github.com/benjeffery/cas_wsgi_middleware.git (from -r /home/jody/panoptes-master/server/REQUIREMENTS (line 23)) | |
| Cloning git://github.com/benjeffery/cas_wsgi_middleware.git to /tmp/pip-NScsfi-build | |
| Running setup.py (path:/tmp/pip-NScsfi-build/setup.py) egg_info for package from git+git://github.com/benjeffery/cas_wsgi_middleware.git | |
| Downloading/unpacking Werkzeug==0.11.11 (from -r /home/jody/panoptes-master/server/REQUIREMENTS (line 2)) | |
| Requirement already satisfied (use --upgrade to upgrade): argparse==1.2.1 in /usr/lib/python2.7 (from -r /home/jody/panoptes-master/server/REQUIREMENTS (line 3)) | |
| Downloading/unpacking simplejson==3.10.0 (from -r /home/jody/panoptes-master/server/REQUIREMENTS (line 4)) | |
| Running setup.py (path:/home/jody/panoptes-master/panoptes_virtualenv/build/simplejson/setup.py) egg_info for package simplejson | |
| Downloading/unpacking requests==2.11.1 (from -r /home/jody/panoptes-master/server/REQUIREMENTS (line 5)) | |
| Downloading/unpacking pymonetdb==1.1.1 (from -r /home/jody/panoptes-master/server/REQUIREMENTS (line 6)) | |
| Downloading pymonetdb-1.1.1-py2.py3-none-any.whl | |
| Downloading/unpacking Cython==0.25.1 (from -r /home/jody/panoptes-master/server/REQUIREMENTS (line 7)) | |
| Running setup.py (path:/home/jody/panoptes-master/panoptes_virtualenv/build/Cython/setup.py) egg_info for package Cython | |
| Unable to find pgen, not compiling formal grammar. | |
| warning: no files found matching '*.pyx' under directory 'Cython/Debugger/Tests' | |
| warning: no files found matching '*.pxd' under directory 'Cython/Debugger/Tests' | |
| warning: no files found matching '*.h' under directory 'Cython/Debugger/Tests' | |
| warning: no files found matching '*.pxd' under directory 'Cython/Utility' | |
| Downloading/unpacking xlrd==1.0.0 (from -r /home/jody/panoptes-master/server/REQUIREMENTS (line 8)) | |
| Running setup.py (path:/home/jody/panoptes-master/panoptes_virtualenv/build/xlrd/setup.py) egg_info for package xlrd | |
| warning: no files found matching 'README.html' | |
| Downloading/unpacking stuf==0.9.16 (from -r /home/jody/panoptes-master/server/REQUIREMENTS (line 9)) | |
| Downloading stuf-0.9.16-py2-none-any.whl | |
| Downloading/unpacking PyYAML==3.12 (from -r /home/jody/panoptes-master/server/REQUIREMENTS (line 10)) | |
| Running setup.py (path:/home/jody/panoptes-master/panoptes_virtualenv/build/PyYAML/setup.py) egg_info for package PyYAML | |
| Downloading/unpacking python-dateutil==2.5.3 (from -r /home/jody/panoptes-master/server/REQUIREMENTS (line 11)) | |
| Downloading/unpacking six==1.10.0 (from -r /home/jody/panoptes-master/server/REQUIREMENTS (line 12)) | |
| Downloading six-1.10.0-py2.py3-none-any.whl | |
| Downloading/unpacking Unidecode==0.4.19 (from -r /home/jody/panoptes-master/server/REQUIREMENTS (line 13)) | |
| Running setup.py (path:/home/jody/panoptes-master/panoptes_virtualenv/build/Unidecode/setup.py) egg_info for package Unidecode | |
| Downloading/unpacking Jinja2==2.8 (from -r /home/jody/panoptes-master/server/REQUIREMENTS (line 14)) | |
| Downloading/unpacking sqlparse==0.2.2 (from -r /home/jody/panoptes-master/server/REQUIREMENTS (line 15)) | |
| Downloading sqlparse-0.2.2-py2.py3-none-any.whl | |
| Downloading/unpacking biopython==1.68 (from -r /home/jody/panoptes-master/server/REQUIREMENTS (line 16)) | |
| Running setup.py (path:/home/jody/panoptes-master/panoptes_virtualenv/build/biopython/setup.py) egg_info for package biopython | |
| warning: no previously-included files matching '*.pyc' found anywhere in distribution | |
| warning: no previously-included files matching '*.pyo' found anywhere in distribution | |
| warning: no previously-included files matching '*.py{}' found anywhere in distribution | |
| warning: no previously-included files matching '*.py-e' found anywhere in distribution | |
| Downloading/unpacking ruamel.yaml==0.12.15 (from -r /home/jody/panoptes-master/server/REQUIREMENTS (line 17)) | |
| Running setup.py (path:/home/jody/panoptes-master/panoptes_virtualenv/build/ruamel.yaml/setup.py) egg_info for package ruamel.yaml | |
| Downloading/unpacking portalocker==1.0.0 (from -r /home/jody/panoptes-master/server/REQUIREMENTS (line 18)) | |
| Downloading portalocker-1.0.0-py2.py3-none-any.whl | |
| Downloading/unpacking diskcache==3.0.6 (from -r /home/jody/panoptes-master/server/REQUIREMENTS (line 19)) | |
| Downloading diskcache-3.0.6-py2.py3-none-any.whl | |
| Downloading/unpacking zarr==2.1.4 (from -r /home/jody/panoptes-master/server/REQUIREMENTS (line 20)) | |
| Running setup.py (path:/home/jody/panoptes-master/panoptes_virtualenv/build/zarr/setup.py) egg_info for package zarr | |
| [zarr] Setting up Blosc extension | |
| [zarr] SSE2 detected | |
| [zarr] AVX2 detected | |
| Traceback (most recent call last): | |
| File "<string>", line 17, in <module> | |
| File "/home/jody/panoptes-master/panoptes_virtualenv/build/zarr/setup.py", line 197, in <module> | |
| run_setup(not is_pypy) | |
| File "/home/jody/panoptes-master/panoptes_virtualenv/build/zarr/setup.py", line 189, in run_setup | |
| license='MIT', | |
| File "/usr/lib/python2.7/distutils/core.py", line 111, in setup | |
| _setup_distribution = dist = klass(attrs) | |
| File "/home/jody/panoptes-master/panoptes_virtualenv/local/lib/python2.7/site-packages/setuptools/dist.py", line 239, in __init__ | |
| self.fetch_build_eggs(attrs.pop('setup_requires')) | |
| File "/home/jody/panoptes-master/panoptes_virtualenv/local/lib/python2.7/site-packages/setuptools/dist.py", line 264, in fetch_build_eggs | |
| replace_conflicting=True | |
| File "/home/jody/panoptes-master/panoptes_virtualenv/local/lib/python2.7/site-packages/pkg_resources.py", line 580, in resolve | |
| dist = best[req.key] = env.best_match(req, ws, installer) | |
| File "/home/jody/panoptes-master/panoptes_virtualenv/local/lib/python2.7/site-packages/pkg_resources.py", line 812, in best_match | |
| dist = working_set.find(req) | |
| File "/home/jody/panoptes-master/panoptes_virtualenv/local/lib/python2.7/site-packages/pkg_resources.py", line 463, in find | |
| raise VersionConflict(dist,req) # XXX add more info | |
| pkg_resources.VersionConflict: (setuptools 2.2 (/home/jody/panoptes-master/panoptes_virtualenv/lib/python2.7/site-packages), Requirement.parse('setuptools>18.0')) | |
| Complete output from command python setup.py egg_info: | |
| [zarr] Setting up Blosc extension | |
| [zarr] SSE2 detected | |
| [zarr] AVX2 detected | |
| Traceback (most recent call last): | |
| File "<string>", line 17, in <module> | |
| File "/home/jody/panoptes-master/panoptes_virtualenv/build/zarr/setup.py", line 197, in <module> | |
| run_setup(not is_pypy) | |
| File "/home/jody/panoptes-master/panoptes_virtualenv/build/zarr/setup.py", line 189, in run_setup | |
| license='MIT', | |
| File "/usr/lib/python2.7/distutils/core.py", line 111, in setup | |
| _setup_distribution = dist = klass(attrs) | |
| File "/home/jody/panoptes-master/panoptes_virtualenv/local/lib/python2.7/site-packages/setuptools/dist.py", line 239, in __init__ | |
| self.fetch_build_eggs(attrs.pop('setup_requires')) | |
| File "/home/jody/panoptes-master/panoptes_virtualenv/local/lib/python2.7/site-packages/setuptools/dist.py", line 264, in fetch_build_eggs | |
| replace_conflicting=True | |
| File "/home/jody/panoptes-master/panoptes_virtualenv/local/lib/python2.7/site-packages/pkg_resources.py", line 580, in resolve | |
| dist = best[req.key] = env.best_match(req, ws, installer) | |
| File "/home/jody/panoptes-master/panoptes_virtualenv/local/lib/python2.7/site-packages/pkg_resources.py", line 812, in best_match | |
| dist = working_set.find(req) | |
| File "/home/jody/panoptes-master/panoptes_virtualenv/local/lib/python2.7/site-packages/pkg_resources.py", line 463, in find | |
| raise VersionConflict(dist,req) # XXX add more info | |
| pkg_resources.VersionConflict: (setuptools 2.2 (/home/jody/panoptes-master/panoptes_virtualenv/lib/python2.7/site-packages), Requirement.parse('setuptools>18.0')) | |
| ---------------------------------------- | |
| Cleaning up... | |
| Command python setup.py egg_info failed with error code 1 in /home/jody/panoptes-master/panoptes_virtualenv/build/zarr | |
| Storing debug log for failure in /tmp/tmpccZowO |
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