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@jodyphelan
Created June 17, 2019 10:43
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name: base
channels:
- conda-forge
- bioconda
- defaults
dependencies:
- _r-mutex=1.0.0=anacondar_1
- asn1crypto=0.24.0=py37_0
- bcftools=1.9=ha228f0b_4
- binutils_impl_linux-64=2.31.1=h6176602_1
- binutils_linux-64=2.31.1=h6176602_3
- bowtie2=2.3.4.3=py37he860b03_1
- bwa=0.7.17=h84994c4_5
- bwidget=1.9.11=1
- bzip2=1.0.6=h14c3975_1002
- ca-certificates=2019.3.9=hecc5488_0
- cairo=1.14.12=h80bd089_1005
- certifi=2019.3.9=py37_0
- cffi=1.11.5=py37he75722e_1
- chardet=3.0.4=py37_1
- conda=4.6.14=py37_0
- conda-env=2.6.0=1
- cryptography=2.4.2=py37h1ba5d50_0
- curl=7.64.1=hf8cf82a_0
- delly=0.8.1=h4037b6b_2
- fontconfig=2.13.1=he4413a7_1000
- freetype=2.10.0=he983fc9_0
- gatk=3.8=7
- gatk4=4.1.2.0=1
- gcc_impl_linux-64=7.3.0=habb00fd_1
- gcc_linux-64=7.3.0=h553295d_3
- gettext=0.19.8.1=hc5be6a0_1002
- gfortran_impl_linux-64=7.3.0=hdf63c60_1
- gfortran_linux-64=7.3.0=h553295d_3
- glib=2.56.2=had28632_1001
- graphite2=1.3.13=hf484d3e_1000
- gxx_impl_linux-64=7.3.0=hdf63c60_1
- gxx_linux-64=7.3.0=h553295d_3
- harfbuzz=1.9.0=he243708_1001
- htslib=1.9=h47928c2_5
- icu=58.2=hf484d3e_1000
- idna=2.8=py37_0
- jpeg=9c=h14c3975_1001
- krb5=1.16.3=h05b26f9_1001
- libboost=1.67.0=h46d08c1_4
- libcurl=7.64.1=hda55be3_0
- libdeflate=1.0=h14c3975_1
- libedit=3.1.20170329=h6b74fdf_2
- libffi=3.2.1=hd88cf55_4
- libgcc-ng=8.2.0=hdf63c60_1
- libgfortran-ng=7.3.0=hdf63c60_0
- libiconv=1.15=h516909a_1005
- libpng=1.6.36=h84994c4_1000
- libssh2=1.8.2=h22169c7_2
- libstdcxx-ng=8.2.0=hdf63c60_1
- libtiff=4.0.10=h648cc4a_1001
- libuuid=2.32.1=h14c3975_1000
- libxcb=1.13=h14c3975_1002
- libxml2=2.9.8=h143f9aa_1005
- make=4.2.1=h14c3975_2004
- minimap2=2.16=h84994c4_1
- ncurses=6.1=he6710b0_1
- openjdk=8.0.192=h14c3975_1003
- openssl=1.1.1b=h14c3975_1
- pango=1.40.14=hf0c64fd_1003
- parallel=20190522=0
- pcre=8.41=hf484d3e_1003
- perl=5.26.2=h14c3975_1002
- pip=18.1=py37_0
- pixman=0.34.0=h14c3975_1003
- pthread-stubs=0.4=h14c3975_1001
- pycosat=0.6.3=py37h14c3975_0
- pycparser=2.19=py37_0
- pyopenssl=18.0.0=py37_0
- pysocks=1.6.8=py37_0
- python=3.7.1=h0371630_7
- r-ape=5.3=r351h0357c0b_0
- r-assertthat=0.2.1=r351h6115d3f_0
- r-backports=1.1.4=r351hcdcec82_0
- r-base=3.5.1=he45234b_1005
- r-bitops=1.0_6=r351h96ca727_1002
- r-catools=1.17.1.2=r351h29659fb_0
- r-cli=1.1.0=r351h6115d3f_0
- r-colorspace=1.4_1=r351hcdcec82_0
- r-crayon=1.3.4=r351h6115d3f_1001
- r-digest=0.6.19=r351h0357c0b_0
- r-fansi=0.4.0=r351h96ca727_1000
- r-gdata=2.18.0=r351h6115d3f_1001
- r-ggplot2=3.1.1=r351h6115d3f_0
- r-glue=1.3.1=r351hcdcec82_0
- r-gplots=3.0.1.1=r351h6115d3f_0
- r-gsalib=2.1=r351_1000
- r-gtable=0.3.0=r351h6115d3f_0
- r-gtools=3.8.1=r351h96ca727_1002
- r-kernsmooth=2.23_15=r351ha65eedd_1002
- r-labeling=0.3=r351h6115d3f_1001
- r-lattice=0.20_38=r351h96ca727_1000
- r-lazyeval=0.2.2=r351hcdcec82_0
- r-magrittr=1.5=r351h6115d3f_1001
- r-mass=7.3_51.4=r351hcdcec82_0
- r-matrix=1.2_17=r351hcdcec82_0
- r-mgcv=1.8_28=r351hcdcec82_0
- r-munsell=0.5.0=r351h6115d3f_1001
- r-nlme=3.1_137=r351ha65eedd_1000
- r-pillar=1.4.1=h6115d3f_0
- r-pkgconfig=2.0.2=r351h6115d3f_1001
- r-plyr=1.8.4=r351h29659fb_1002
- r-r6=2.4.0=r351h6115d3f_0
- r-rcolorbrewer=1.1_2=r351h6115d3f_1001
- r-rcpp=1.0.1=r351h0357c0b_0
- r-reshape=0.8.8=r351h96ca727_0
- r-reshape2=1.4.3=r351h29659fb_1003
- r-rlang=0.3.4=r351hcdcec82_0
- r-scales=1.0.0=r351h29659fb_1001
- r-stringi=1.4.3=r351h0357c0b_0
- r-stringr=1.4.0=r351h6115d3f_0
- r-tibble=2.1.3=r35hcdcec82_0
- r-utf8=1.1.4=r351h96ca727_1000
- r-vctrs=0.1.0=r351h96ca727_1000
- r-viridislite=0.3.0=r351h6115d3f_1001
- r-withr=2.1.2=r351h6115d3f_1000
- r-zeallot=0.1.0=r351h6115d3f_1000
- readline=7.0=h7b6447c_5
- requests=2.21.0=py37_0
- ruamel_yaml=0.15.46=py37h14c3975_0
- samtools=1.9=h8571acd_11
- setuptools=40.6.3=py37_0
- six=1.12.0=py37_0
- sqlite=3.26.0=h7b6447c_0
- tbb=2019.4=h6bb024c_0
- tk=8.6.9=h84994c4_1000
- tktable=2.10=h14c3975_0
- tqdm=4.32.1=py_0
- trimmomatic=0.39=1
- urllib3=1.24.1=py37_0
- wheel=0.32.3=py37_0
- xorg-kbproto=1.0.7=h14c3975_1002
- xorg-libice=1.0.9=h516909a_1004
- xorg-libsm=1.2.3=h84519dc_1000
- xorg-libx11=1.6.7=h14c3975_1000
- xorg-libxau=1.0.9=h14c3975_0
- xorg-libxdmcp=1.1.3=h516909a_0
- xorg-libxext=1.3.4=h516909a_0
- xorg-libxrender=0.9.10=h516909a_1002
- xorg-renderproto=0.11.1=h14c3975_1002
- xorg-xextproto=7.3.0=h14c3975_1002
- xorg-xproto=7.0.31=h14c3975_1007
- xz=5.2.4=h14c3975_4
- yaml=0.1.7=had09818_2
- zlib=1.2.11=h7b6447c_3
- pip:
- tbprofiler==2.4.1
prefix: /home/ubuntu/miniconda3
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