Iteration

gistfile1.java

   private int iterate(IAtomContainer container) {
        int total = 0;
        for (int d = 0; d < 8; d++) {
            for (IAtom atom : container.atoms()) {
                for (IBond bond : container.getConnectedBondsList(atom)) {
                    IAtom other = bond.getConnectedAtom(atom);
                    total += other.getAtomicNumber();
                }
            }
        }
        return total;
    }

    private int iterate(Graph graph) {
        int total = 0;
        for (int d = 0; d < 8; d++) {
            for (int i = 0; i < graph.n(); i++) {
                for (int j : graph.neighbors(i)) {
                    total += graph.getVertexValue(j).getAtomicNumber();
                }
            }
        }
        return total;
    }

    private int iterate(ConnectionMatrix cm) {
        byte [][] graph = cm.graph;
        int total = 0;
        for (int d = 0; d < 8; d++) {
            for (int i = 0; i < graph.length; i++) {
                for (int j = 0; j < graph[i].length; j++) {
                    if(graph[i][j] != 0)
                        total += cm.atoms[j].getAtomicNumber();
                }
            }
        }
        return total;
    }