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July 30, 2017 10:46
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InChI Abstract
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Building on Sand: Standard InChIs on Non-Standard Molfiles | |
John Mayfield | |
The molfile serves as a de facto standard for chemical information exchange. It is perhaps the most | |
widely supported format with its core syntax being easy to understand, parse, and generate. Beyond | |
the core syntax, more advanced features such as sgroups and enhanced stereochemistry are rarely | |
supported, often only being partially implemented and used. Additionally, several vendors, | |
toolkits, and service providers have added extended syntaxto their molfiles to solve particular | |
corner cases or representation problems.This talk will provide a brief summary of the less widely | |
supported features of the molfile including sgroups and enhanced stereochemistry. Additionally, | |
a survey of how extensions can/have been implemented and which extensions exist "in the wild". | |
Special attention will be paid to capturing of coordination bonds for extending the InChI to | |
handle organometallics. |
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