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wd <- system("echo $(git rev-parse --show-toplevel)", intern = TRUE) | |
setwd(wd) | |
source(paste0(wd, "/influenza/scripts/depends.R")) | |
output_dir <- fs::path(paste0(wd, "/influenza/papers/univariate/outputs")) | |
# nhs_data path for getting population sizes: | |
nhs_data_path <- "" # Removed path to influenza data + population catchments per trust |