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joshmoore / README.md
Created September 7, 2012 12:23
Generate OME's download page
@joshmoore
joshmoore / .gitignore
Created November 21, 2012 08:25
Example of batch loading images for https://www.openmicroscopy.org/community/viewtopic.php?f=6&t=3341
*.class
libs
@joshmoore
joshmoore / lda.sh
Created November 30, 2012 14:28 — forked from dpwrussell/lda.sh
ldap experiment to determine how to query LDAP without basing with an OU
#!/bin/bash
(
set -e
set -u
export CLASSPATH=.:`echo lib/server/*.jar | sed 's/ /:/g'`
cat > ldap.xml <<EOF
@joshmoore
joshmoore / .gitignore
Last active December 10, 2015 21:09
.*
@joshmoore
joshmoore / lock_files_in_directory.py
Last active December 14, 2015 16:58 — forked from chris-allan/lock_files_in_directory.py
#!/usr/bin/env python
import traceback
import tempfile
import fcntl
import sys
import os
try:
d, = sys.argv[1:]
except ValueError:
@joshmoore
joshmoore / prs.txt
Last active December 19, 2015 02:29
Current PR list
openmicroscopy
****************************************************************************************************
PRs on dev_4_4 without note for develop
****************************************************************************************************
120e393 Merge pull request #1213 from jburel/reader-close => see #1191 (relevant commit cherry-picked)
5373348 Merge pull request #1033 from jburel/download-image-metadata 10 weeks ago => #1064
8cb50fb Merge pull request #1010 from jburel/big-image-refactor 3 months ago => See #1013
6fe6155 Merge pull request #981 from scottlittlewood/insight-import-as-ui-dev-4-4 3 months ago => see #1015
8937406 Merge pull request #1128 from joshmoore/10824-reflective-network 8 weeks ago => see #1278
@joshmoore
joshmoore / Metadata_Search.py
Created August 23, 2013 13:38 — forked from will-moore/Metadata_Search.py
"""
This script searches for Images, using database queries queries generated
from a number of parameters.
"""
import omero.scripts as scripts
from omero.gateway import BlitzGateway
from omero.rtypes import *
from datetime import datetime
@joshmoore
joshmoore / Metadata_Search.py
Created August 23, 2013 13:50 — forked from will-moore/Metadata_Search.py
"""
This script searches for Images, using database queries queries generated
from a number of parameters.
"""
import omero.scripts as scripts
from omero.gateway import BlitzGateway
from omero.rtypes import *
from datetime import datetime
@joshmoore
joshmoore / VM.patch
Last active December 25, 2015 02:19
Patch for OMERO-stable-release to create vboxes
diff --git a/docs/install/VM/omerovm.sh b/docs/install/VM/omerovm.sh
index 0ec39c1..c7ac376 100644
--- a/docs/install/VM/omerovm.sh
+++ b/docs/install/VM/omerovm.sh
@@ -41,6 +41,7 @@ function installvm ()
SCP="scp -2 -o NoHostAuthenticationForLocalhost=yes -o UserKnownHostsFile=/dev/null -o StrictHostKeyChecking=no -o CheckHostIP=no -o PasswordAuthentication=no -o ChallengeResponseAuthentication=no -o PreferredAuthentications=publickey -i omerovmkey -P $SSH_PF"
SSH="ssh -2 -o StrictHostKeyChecking=no -i omerovmkey -p $SSH_PF -t"
echo "Copying scripts to VM"
+ $SCP ../../../target/OMERO.server*zip omero@localhost:~/
$SCP driver.sh omero@localhost:~/
@joshmoore
joshmoore / makeUsers.py
Last active December 27, 2015 22:59 — forked from ximenesuk/makeUsers.py
from omero.gateway import BlitzGateway
import omero
from omero.rtypes import rstring
from omero_model_ProjectI import ProjectI
from omero_model_DatasetI import DatasetI
from omero_model_ProjectDatasetLinkI import ProjectDatasetLinkI
from omero_model_ExperimenterI import ExperimenterI
from omero_model_ExperimenterGroupI import ExperimenterGroupI
from omero_model_PermissionsI import PermissionsI
from omero_model_TagAnnotationI import TagAnnotationI