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RMSE and trend fit relationship - https://github.com/USGS-R/mda.lakes/issues/91
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# work-through of https://github.com/USGS-R/mda.lakes/issues/91 | |
set.seed(443) | |
trend = 0.04 #in units per year, kinda like wtemp | |
freq = 26 #sample freq | |
year = (1:(30*freq)/freq) | |
yobs = 10*sin(year*2*pi)+ 10 + trend*year + rnorm(length(year), sd=0) | |
ymod = 10*sin(year*2*pi) + 10 + (trend*max(year)/2) | |
plot(year, yobs) | |
fit <- stl(ts(yobs, frequency = 26), "periodic") | |
trend_fit <- fit$time.series[,"trend"] | |
lines(year, trend_fit, col = "red") | |
slope <- (trend_fit[length(trend_fit)] - trend_fit[1]) / year[length(year)] | |
plot(year, yobs, main = round(sqrt(mean((yobs - ymod)^2)), 2)) | |
lines(year, ymod, col = "red") | |
##### | |
yobs2 <- yobs + rnorm(length(year), sd = 0.6) | |
plot(year, yobs2, main = round(sqrt(mean((yobs2 - ymod)^2)), 2)) | |
lines(year, ymod, col = "red") | |
##### | |
par(mfrow = c(2, 1)) | |
yobs3 <- yobs + rnorm(length(year)) | |
title <- paste0("RMSE=", round(sqrt(mean((yobs3 - ymod)^2)), 2), | |
" ME=", round(mean(yobs3 - ymod), 3), | |
" MAE=", round(mean(abs(yobs3 - ymod)), 3), | |
" MAPE=", round(mean(abs((yobs3 - ymod) / yobs3)), 3), | |
" RMSE w trend=", round(sqrt(mean((trend_fit - ymod)^2)), 2)) | |
plot(year, yobs3, main = title) | |
lines(year, ymod, col = "red") | |
# hist(yobs3 - ymod) | |
##### | |
ymod2 = 10*sin(year*2*pi) + 10 + trend*year | |
title <- paste0("RMSE=", round(sqrt(mean((yobs3 - ymod2)^2)), 2), | |
" ME=", round(mean(yobs3 - ymod2), 3), | |
" MAE=", round(mean(abs(yobs3 - ymod2)), 3), | |
" MAPE=", round(mean(abs((yobs3 - ymod2) / yobs3)), 3), | |
" RMSE w trend=", round(sqrt(mean((trend_fit - ymod2)^2)), 2)) | |
plot(year, yobs3, main = title) | |
lines(year, ymod2, col = "red") | |
# hist(yobs3 - ymod2) | |
##### | |
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