Created
June 18, 2019 05:44
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nn parallel test. Can run with 1-4 procs.
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#!/usr/bin/env python | |
# coding: utf-8 | |
import underworld as uw | |
import numpy as np | |
import glucifer | |
import time | |
# In[11]: | |
mesh = uw.mesh.FeMesh_Cartesian(elementRes=(500,500)) | |
mvar = mesh.add_variable(nodeDofCount=1, dataType="double") | |
rvar = mesh.add_variable(nodeDofCount=1, dataType="double") | |
rvar.data[:] = uw.mpi.rank | |
# In[12]: | |
swarm = uw.swarm.Swarm(mesh) | |
svar = swarm.add_variable(count=1, dataType="int") | |
# In[14]: | |
# coord = np.random.random(size=(4,2)) | |
coord = np.array([ | |
[ 0.60912071, 0.19463198], | |
[ 0.45136018, 0.8336581 ], | |
[ 0.12331671, 0.40281476], | |
[ 0.83136761, 0.87640524] ]) | |
# In[15]: | |
swarm.add_particles_with_coordinates(coord) | |
swarm.shadow_particles_fetch() | |
# In[16]: | |
rank = uw.mpi.rank | |
comm = uw.mpi.comm | |
# get particle populations on procs to assign global id | |
counts = comm.allgather(swarm.particleLocalCount) | |
prev = sum(counts[:rank]) | |
svar.data[:,0] = np.arange(prev, prev+counts[rank]) | |
# In[18]: | |
start = time.clock() | |
mvar.data[:] = svar.evaluate(mesh) | |
if uw.mpi.rank == 0: | |
print("Time taken: {:.5f} sec".format(time.clock()-start)) | |
# In[19]: | |
store = glucifer.Store("viz") | |
fig = glucifer.Figure(store)#figsize=(800,600)) | |
point = glucifer.objects.Points(swarm, fn_size=10., colourBar=False) | |
# fig.append(glucifer.objects.Mesh(mesh)) | |
fig.append(point) | |
surf = glucifer.objects.Surface(mesh, mvar, onMesh=True) | |
# surf = glucifer.objects.Surface(mesh, svar, onMesh=True, resolution=500) | |
point.colourBar["align"] = "right" | |
point.colourBar["position"] = 0 | |
point.colourBar["size"] = [0.75,0.02] | |
fig.append(surf) | |
fig.show() | |
# In[ ]: | |
mH = mesh.save("mesh.h5") | |
rH = rvar.save("rank.h5") | |
fH = mvar.save("field.h5") | |
mvar.xdmf("field.xdmf", fH, 'field', mH, 'mesh') | |
rvar.xdmf("rank.xdmf", rH, 'rank', mH, 'mesh') |
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