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ShinieR Interaction with <<-
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library(shiny) | |
library(ggplot2) | |
library(reshape2) | |
library(randomForest) | |
df = ChickWeight | |
n = nrow(df) | |
perfdf = data.frame(ntree=as.numeric(), mse_train=as.numeric(), mse_test=as.numeric()) | |
count = 0 | |
shinyServer(function(input, output) { | |
output$runs <- renderText({ | |
train <- df[sample(n),][1:478,] | |
test <- df[sample(n),][479:n,] | |
rf = randomForest(weight ~ Time + Diet, data=train, ntree = input$ntree) | |
train$mse <- (predict(rf, train) - train$weight)^2 | |
test$mse <- (predict(rf, test) - test$weight)^2 | |
perfdf <<- rbind(perfdf, data.frame(ntree=input$ntree, mse_train=mean(train$mse), mse_test=mean(test$mse))) | |
count <<- count + 1 | |
paste("random forest count :", count) | |
}) | |
output$perf <- renderPlot({ | |
input$ntree | |
perfdf <- melt(perfdf, id.vars = c("ntree"), | |
variable.name = "variable", value.name = "value" | |
) | |
p = ggplot() + geom_point(data=perfdf, aes(ntree, value, colour=variable)) | |
# p = p + facet_grid( variable ~ . , scales = "free_y") | |
p = p + stat_smooth(data=perfdf, aes(ntree, value, colour=variable), se = FALSE) | |
# geom_smooth(data=perfdf, aes(ntree, value, colour=variable)) | |
p + ggtitle("train set performance") | |
}, height=400) | |
}) |
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library(shiny) | |
shinyUI(fluidPage( | |
# Application title | |
titlePanel("Shiny App"), | |
# Sidebar with a slider input for number of bins | |
sidebarLayout( | |
sidebarPanel( | |
sliderInput("ntree", | |
"give the number of trees:", | |
min = 1, | |
max = 200, | |
value = 10, step=1) | |
), | |
# Show a plot of the generated distribution | |
mainPanel( | |
textOutput("runs"), | |
plotOutput("perf") | |
) | |
) | |
)) |
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