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| # this snippet shows how to convert a .h5 transformation to a .nii.gz displacement field using the ants python library | |
| # based on this commend https://github.com/ANTsX/ANTs/issues/54#issuecomment-2085595485 | |
| # to do this, we need the reference/fixed image and the .h5 transformation | |
| from ants import utils as utils_ants | |
| args = ['-d', '3', | |
| '-r', 'reference.nii.gz', | |
| '-t', 'transform.h5', |