Created
April 30, 2021 20:48
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Convert FESOM2 data to UGRID that QGIS3.16.6 can understand
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import xarray as xr | |
import numpy as np | |
import pyfesom2 as pf | |
# we make it similar to this file | |
# ugrid = xr.open_dataset('./MDAL/tests/data/ugrid/ADCIRC/ADCIRC_BG_20190910_1t.nc') | |
data = xr.open_mfdataset('/Users/nkolduno/PYTHON/DATA/LCORE2/temp.fesom.*.nc') | |
mesh = pf.load_mesh('/Users/nkolduno/PYTHON/DATA/core2/') | |
elem2 = mesh.elem[mesh.no_cyclic_elem] | |
ds = xr.Dataset({'mesh_topology': ( np.array(-2147483647, dtype='int32')), | |
'elem': (["nelem", "three"], elem2.astype('int32')), | |
'variable': (['nod2'], data.temp[0,:,0].astype('float32')), | |
}, | |
coords={'latitude': (['nod2'], mesh.y2), | |
'longitude': (['nod2'], mesh.x2), | |
}) | |
ds.mesh_topology.attrs = {'long_name': 'mesh topology', | |
'standard_name': 'mesh_topology', | |
'dimension': 2, | |
'node_coordinates': 'longitude latitude', | |
'face_node_connectivity': 'elem', | |
'cf_role': 'mesh_topology', | |
'topology_dimension': 2} | |
ds.latitude.attrs = {'long_name': 'latitude', | |
'standard_name': 'latitude', | |
'units': 'degrees_north', | |
'positive': 'north'} | |
ds.longitude.attrs = {'long_name': 'longitude', | |
'standard_name': 'longitude', | |
'units': 'degrees_east', | |
'positive': 'east'} | |
ds.elem.attrs = {'long_name': 'elem', | |
'standard_name': 'face_node_connectivity', | |
'units': 'nondimensional', | |
'start_index': 0} | |
ds.attrs = {'Conventions': 'CF-1.6, UGRID-1.0'} | |
ds.to_netcdf('output.nc') |
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