Created
April 28, 2010 21:20
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| diff --git a/Bio/GenBank/Scanner.py b/Bio/GenBank/Scanner.py | |
| index cc72e7f..18d2551 100644 | |
| --- a/Bio/GenBank/Scanner.py | |
| +++ b/Bio/GenBank/Scanner.py | |
| @@ -161,9 +161,17 @@ class InsdcScanner: | |
| while line[:self.FEATURE_QUALIFIER_INDENT] == self.FEATURE_QUALIFIER_SPACER: | |
| line = self.handle.readline() | |
| else: | |
| - #Build up a list of the lines making up this feature: | |
| - feature_key = line[2:self.FEATURE_QUALIFIER_INDENT].strip() | |
| - feature_lines = [line[self.FEATURE_QUALIFIER_INDENT:]] | |
| + # Build up a list of the lines making up this feature. | |
| + # Feature key and location lines handled with line splitting | |
| + # to allow for longer feature keys. | |
| + feature_key = line.split()[1] | |
| + | |
| + line1 = line[len(line.split()[0]):].lstrip() | |
| + feature_lines = [line1[len(line1.split()[0]):].lstrip()] | |
| + # OR | |
| + # feature_lines = [' '.join(line.split()[2:])] | |
| + # but this has potential to change the content | |
| + | |
| line = self.handle.readline() | |
| while line[:self.FEATURE_QUALIFIER_INDENT] == self.FEATURE_QUALIFIER_SPACER \ | |
| or line.rstrip() == "" : # cope with blank lines in the midst of a feature |
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