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May 23, 2020 20:46
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Output when PhantomJS used i.e tests_init()
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tests_init() | |
Starting phantomjs binary. To shut it down, run: | |
pJS$stop() | |
checking phantomjs versions: | |
BEGIN: PREDOWNLOAD | |
BEGIN: DOWNLOAD | |
BEGIN: POSTDOWNLOAD | |
> tests_run(filter = "renderer") | |
[1] "axis angle rotate" | |
[1] 0.75 | |
[1] "One character value" | |
[1] "coord" | |
[1] "facet-coord" | |
[1] "facet lines" | |
[1] "facet_grid(space=\"free\")" | |
[1] "facet-trivial" | |
[1] "facet-strips" | |
[1] "geom_abline" | |
[1] "global variables" | |
[1] "hjust text anchor" | |
[1] 0.8 | |
[1] 1.5 | |
[1] 0.5 1.0 | |
[1] 1 | |
[1] 0.5 | |
[1] 0.7 | |
[1] "hline" | |
[1] "aes(href)" | |
[1] "HTML page title" | |
[1] "Interactive facets" | |
[1] "interactivity" | |
[1] "knitting multiple animint plots in a single Rmd" | |
-- 1. Error: (unknown) (@test-renderer1-knit-print.R#12) ---------------------- | |
The file 'animint-htmltest/index.Rmd' does not exist. | |
Backtrace: | |
1. rmarkdown::render(index.file) | |
4. rmarkdown:::abs_path(input) | |
[1] "Labels" | |
[1] "legends" | |
[1] "linetype" | |
[1] "malaria data viz" | |
-- 2. Error: (unknown) (@test-renderer1-malaria.R#19) ------------------------- | |
object 'malaria' not found | |
[1] "many facets" | |
[1] "Panel background" | |
[1] "params" | |
[1] "PeakConsistency" | |
-- 3. Error: (unknown) (@test-renderer1-PeakConsistency.R#15) ----------------- | |
object 'PeakConsistency' not found | |
Backtrace: | |
1. animint2::geom_segment(...) | |
4. base::subset(PeakConsistency$model, increase == 1) | |
[1] "rect size" | |
[1] "Segment size" | |
[1] "Text" | |
[1] "aes(tooltip)" | |
[1] "url fragment identifier" | |
[1] "variable value" | |
[1] "WorldBank-NA" | |
[1] "Interactive Legends" | |
List of 1 | |
$ : language factor(vs) | |
List of 1 | |
$ : language factor(vs) | |
chr [1:2] "vs0" "vs1" | |
List of 2 | |
$ : symbol vs.fac | |
$ : symbol vs.fac2 | |
[1] "no axes" | |
[1] "PredictedPeaks data set" | |
[1] "showSelected=var, showSelected2=var" | |
[1] "VariantModels data viz" | |
-- 4. Error: (unknown) (@test-renderer2-VariantModels.R#5) -------------------- | |
object 'VariantModels' not found | |
Backtrace: | |
1. base::subset(VariantModels$auc, metric.name == "min.error") | |
[1] "geom_widerect" | |
[1] "ChromHMMinit data set" | |
[1] "FunctionalPruning" | |
-- 5. Error: (unknown) (@test-renderer3-FunctionalPruning.R#4) ---------------- | |
object 'FunctionalPruning' not found | |
Backtrace: | |
1. animint2::geom_line(...) | |
2. animint2::layer(...) | |
3. animint2::fortify(data) | |
[1] "mixtureKNN data set" | |
-- 6. Error: (unknown) (@test-renderer3-knn.R#5) ------------------------------ | |
object 'mixtureKNN' not found | |
[1] "lilac chaser vi" | |
[1] "path key" | |
[1] "point fill NA" | |
[1] "TestROC" | |
-- 7. Error: (unknown) (@test-renderer3-roc.R#16) ----------------------------- | |
object 'TestROC' not found | |
Backtrace: | |
1. animint2::geom_path(...) | |
2. animint2::layer(...) | |
3. animint2::fortify(data) | |
[1] "stat bin" | |
mapping: x = count, group = stack, fill = stack, showSelected1 = facet | |
geom_bar: na.rm = FALSE, width = NULL | |
stat_bin: binwidth = 1, bins = NULL, na.rm = FALSE, pad = FALSE, width = NULL | |
position_identity | |
[1] "geom_point_stroke" | |
[1] "Inf" | |
-- 8. Error: (unknown) (@test-renderer4-Inf.R#36) ----------------------------- | |
incorrect number of dimensions | |
[1] "make_xrect" | |
[1] "NA separate lines" | |
[1] "prostateLasso data set" | |
-- 9. Error: (unknown) (@test-renderer4-prostateLasso.R#9) -------------------- | |
object 'prostateLasso' not found | |
[1] "update_axes - multiple single selectors" | |
[1] "update_axes" | |
[1] "ChromHMMiterations data set" | |
-- 10. Error: (unknown) (@test-renderer5-ChromHMMiterations.R#5) -------------- | |
object 'ChromHMMiterations' not found | |
Backtrace: | |
1. base::data.frame(ChromHMMiterations$emission, parameters = "emission") | |
[1] "tooltip-interactivity" | |
== testthat results =========================================================== | |
[ OK: 956 | SKIPPED: 0 | WARNINGS: 46 | FAILED: 10 ] | |
1. Error: (unknown) (@test-renderer1-knit-print.R#12) | |
2. Error: (unknown) (@test-renderer1-malaria.R#19) | |
3. Error: (unknown) (@test-renderer1-PeakConsistency.R#15) | |
4. Error: (unknown) (@test-renderer2-VariantModels.R#5) | |
5. Error: (unknown) (@test-renderer3-FunctionalPruning.R#4) | |
6. Error: (unknown) (@test-renderer3-knn.R#5) | |
7. Error: (unknown) (@test-renderer3-roc.R#16) | |
8. Error: (unknown) (@test-renderer4-Inf.R#36) | |
9. Error: (unknown) (@test-renderer4-prostateLasso.R#9) | |
10. Error: (unknown) (@test-renderer5-ChromHMMiterations.R#5) | |
Error: testthat unit tests failed |
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