Functions:
# encoding: ACTG
def nuc2int_nochecking(b):
return (ord(b) >> 1) & 3, True
def nuc2int_if(b):
if b == 'a' or b == 'c' or b == 'g' or b == 't' \
or b == 'A' or b == 'C' or b == 'G' or b == 'T':
Functions:
# encoding: ACTG
def nuc2int_nochecking(b):
return (ord(b) >> 1) & 3, True
def nuc2int_if(b):
if b == 'a' or b == 'c' or b == 'g' or b == 't' \
or b == 'A' or b == 'C' or b == 'G' or b == 'T':
| #!/bin/bash | |
| # | |
| # Author: SuperPaintman <[email protected]> | |
| # | |
| ### | |
| # Constants | |
| ### | |
| RETVAL=0 |
| # Draw a normal distribution curve on top of a histogram | |
| # of any vector | |
| # | |
| # @param data A numeric vector | |
| hist_and_norm <- function(data){ | |
| hist_min <- mean(data) - 4*sd(data) | |
| hist_max <- mean(data) + 4*sd(data) | |
| normalx <- seq(hist_min, hist_max, by = 1) | |
| normaly <- dnorm(normalx, mean = mean(data), sd = sd(data)) |
This assumes you are now connected to the server via SSH.
sudo -s Enter root mode for admin accessgroupadd devgroup Create new group to be later granted access to /var/www/htmluseradd -G root,devgroup masterdev Create new root user. Also add to the devgrouppasswd masterdev Change password for the new root user| #!/bin/bash | |
| version=1.0.1 | |
| versionDate="2014-02-14" | |
| function showHelp() { | |
| echo "watchfile - monitor file(s)/command and perform action when changed | |
| Possible ways of usage | |
| ---------------------------------------- |
| -- 1. Place in ~/Library/Scripts and enable the Applescript menu via the Applescript Editor | |
| -- 2. Substitute "vpn.example.com" and "redacted" for your VPN server and password | |
| -- 3. Open Security & Privacy System Preferences, go to Privacy, Accessibility | |
| -- 4. Enable Applescript Editor and System UI Server | |
| -- 5. Trigger script from the menu | |
| -- 6. Enjoy being connected | |
| tell application "Cisco AnyConnect Secure Mobility Client" | |
| activate | |
| end tell |
| import json | |
| import boto | |
| from django.db import models | |
| from django.conf import settings | |
| from django.contrib.auth.models import User | |
| class UploadToken(models.Model): | |
| user = models.ForeignKey(User) | |
| created = models.DateTimeField(auto_now_add=True) |
| #!/usr/bin/env python | |
| ''' | |
| Automatically estimate insert size of the paired-end reads for a given SAM/BAM file. | |
| Usage: getinsertsize.py <SAM file> or samtools view <BAM file> | getinsertsize.py - | |
| Author: Wei Li | |
| Copyright (c) <2015> <Wei Li> | |