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lh3/Dockerfile

Created March 18, 2020 20:26
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Dockerfile
#creates a base image from condo
FROM continuumio/miniconda3
SHELL ["/bin/bash", "-c"]
COPY environment.yml .
#run environment
#RUN conda env create -f environment.yml
RUN conda init bash
RUN echo "conda activate env" > ~/.bashrc
ENV PATH /opt/conda/envs/env/bin:$PATH
COPY INSTALLATION.sh .
#run INSTALLATION.sh to install dependencies in Docker
RUN chmod +x /INSTALLATION.sh && /INSTALLATION.sh
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