Vispy is a high performance 2D/3D visualization library which uses the GPU intensively through OpenGL. This Google Summer of code project proposes to add an API to Vispy to visualize static and dynamic (boolean, linear and Bayesian)
Lucas van Dijk lrvdijk
lrvdijk
/ dbg_dot.py
Last active
January 20, 2021 23:24
Visualize unitgs in a De Bruijn graph. Emulates Bifrost's construction algorithm, but with more explicit use of nodes and edges.
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| """ | |
| This script creates a small-scale De Bruijn graph visualization using graphviz. | |
| The construction of the De Bruijn graph is done in a similar way how Bifrost | |
| constructs the graph, although with different data structures (more explicit | |
| use of nodes and edges). | |
| Usage: | |
| dbg_dot.py k FASTA | dot -Tpng -o output.ong |
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| #!/usr/bin/env python3 | |
| """ | |
| Graph generator for wiebetaaltwat.nl | |
| ==================================== | |
| Written by Lucas van Dijk <[email protected]> | |
| """ | |
| from bs4 import BeautifulSoup |
lrvdijk
/ gsoc-application.rst
Last active
August 29, 2015 14:17
I hereby claim:
- I am lrvdijk on github.
- I am sh4wn (https://keybase.io/sh4wn) on keybase.
- I have a public key whose fingerprint is EABC FBBB 91DD 0E13 03BF 2302 5A16 2DC1 C480 6F5C
To claim this, I am signing this object:
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| from django.contrib import admin | |
| from mezzanine.core.admin import StackedDynamicInlineAdmin | |
| from mezzanine.pages.admin import PageAdmin | |
| from helios3d.sponsors.models import Sponsor, SponsorCategory, SponsorPage | |
| from copy import deepcopy | |
| sponsor_admin_fieldsets = deepcopy(PageAdmin.fieldsets) | |
| sponsor_admin_fieldsets[0][1]['fields'].insert(-3, 'categories') |
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| /** | |
| * Voltmeter based on atmega168, sends Analog2Digital conversion | |
| * results over RS232 to the connected computer | |
| * | |
| * Created by Lucas van Dijk | |
| * http://www.return1.net | |
| */ | |
| #ifndef F_CPU | |
| #define F_CPU 3686400 |
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| /** | |
| * Voltmeter based on atmega168, sends Analog2Digital conversion | |
| * results over RS232 to the connected computer | |
| * | |
| * Created by Lucas van Dijk | |
| * http://www.return1.net | |
| */ | |
| #ifndef F_CPU | |
| #define F_CPU 8000000 |